Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02442 ATGGGGAGCAAAGGGGGTTGGTTTTCCGCAGTGAAGAAAGTTCTCAGTCcagaaagcaagaaagacaAGaAAAACCAGAAATCGAAGAAAAAATGGTTTGGCAAGCACAAGGATTCCAATCAAGTTTTGTCAAAAGAAGAAGCACCAGTTCCTGTCTCTGTGGCTCCCCCTTTTCCACCAATTGAACACATCAACTTAGCCAACGCAGGTAATGAACAGACCAAGCATGCTTATTCTGTGGCTCTTGCCACTGCTGCTGCAGCAAAGGctgctgttgctgctgctcAGGCAGCTGCAGAGGTTGTTCGCCTCACAGGTATACCTCTTGTACCCGGAAAGTCAAAGGTAGAAATAGCAGCCATCAAGATTCAGACAGCATTCCGAGGATATTTGGCAAGAAGGGCGTTGCGTGCCTTGAAAGGATTGGTGAGGTTGAAAACGTTGATAAAAGGGCAATCTGTTAAACGGCAATCAACTACCACCTTACAATGCATGCAAACTCTTGCACGATTACAGTCCCAGATTCGTGAAAGGAGAATCAGAATGTCTGAGGAGAACCAGGTTCTCCAGCTTCAATTGCTGCagaaacatgaaaaagaaCTTGAGAAGTTGCAAGCCTCTCTGGTTGGAGAAGAATGGGATGATACCTTTCAATCAAAGGAGCAAATTGAAGCAAGACAGGCAAACAGGCAAGAAGCTGCTataagaagagagagagcttTGGCCTATGCATACTCGCATCAGCAAACATGGAGGAACTCTTCAAAATCTGTCACTCCCACATTTATGGATCCAAGCAACCCCCATTGGGGTTGGAGTTGGATAGAAAGATGGATGGCAACTAGACCATGGGAGAGTCCAAATGACCATGCGTCATCTGTAAAGAGTGCAGCAGCAAGCTATCCCTTATCTGTTGGGGAAATCACCCAATTGTACGCTGCTCGTGATCGCAGCCATGATTACAAGCCTTCCCCAGCTCGCCAAAAATCAAGCCAGCCACTAAGTCGCCAGTCCCCTTCAACGCTAGCTTCTGATGACTCCAGGAGCTTGTTCAGTGTTCAATCAGAACGATACAGCAGGAGGTATAGCCTTGCAGGGTCATCATCAATGAGAGATGATGAGAGCCTTGCAAGCTCACCTGCCATCCCAAGTTACATGGCACCTACAAAGGCAACTATGGTGAGATCCAAAACACAAAGTCCATTAGGTGTAAAAAATGTGAAGCCAGGAAAAGCTTTAGACTCTTCTGCTAAGAGACGGCTATCCTTCTCAGCTTCTCCAAGGAGGCCTGTTACTGCTAAGAATGTTTCTAAGCTCAGTCAAGATAAAGTTACTAATGGAAGGAGATTGTG 1352 0.4401 MGSKGGWFSAVKKVLSPESKKDKKNQKSKKKWFGKHKDSNQVLSKEEAPVPVSVAPPFPPIEHINLANAGNEQTKHAYSVALATAAAAKAAVAAAQAAAEVVRLTGIPLVPGKSKVEIAAIKIQTAFRGYLARRALRALKGLVRLKTLIKGQSVKRQSTTTLQCMQTLARLQSQIRERRIRMSEENQVLQLQLLQKHEKELEKLQASLVGEEWDDTFQSKEQIEARQANRQEAAIRRERALAYAYSHQQTWRNSSKSVTPTFMDPSNPHWGWSWIERWMATRPWESPNDHASSVKSAAASYPLSVGEITQLYAARDRSHDYKPSPARQKSSQPLSRQSPSTLASDDSRSLFSVQSERYSRRYSLAGSSSMRDDESLASSPAIPSYMAPTKATMVRSKTQSPLGVKNVKPGKALDSSAKRRLSFSASPRRPVTAKNVSKLSQDKVTNGRRL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02442 450 SMART iq_5 115 137 IPR000048 GO:0005515
Bva03g02442 450 Coils Coil 194 214 - -
Bva03g02442 450 MobiDBLite consensus disorder prediction 428 443 - -
Bva03g02442 450 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Bva03g02442 450 MobiDBLite consensus disorder prediction 362 450 - -
Bva03g02442 450 MobiDBLite consensus disorder prediction 325 350 - -
Bva03g02442 450 MobiDBLite consensus disorder prediction 1 48 - -
Bva03g02442 450 PANTHER IQ-DOMAIN 5-RELATED 1 431 - -
Bva03g02442 450 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 431 - -
Bva03g02442 450 MobiDBLite consensus disorder prediction 318 350 - -
Bva03g02442 450 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02442 Bva-Chr3 20739613 20742626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02442 1 430 IQD Protein Family AT5G03040 46.903 3.04e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02442 - - tcc:18586349 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02442 03 20739613 20742626 Bva03g02442 03 20739613 20742626 ECH