Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02438 ATGGAATTCAAAGTGAAAGCTGCAACATCTCCTCCAACTATCCCAATTCCTCTTCCCACTTTGCTCTCCAAGtctccttcttcctcttcttccctTCATTCTCAATCTCCTCCACCTTTTCCTTCACCCTCTCGATCCTCTCCCTCCGCTCCGCTGCCCCCACCCCCGCAATCTCCTCCTCCACCGGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGCCGATGCGTCGAGAAGTGCGTCTTAGCTCCCTATTTCCCTCCCACTGATCCACTCAAGTTCACCATTGCCCACAGAGTCTTCGGGGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCTCAGAGAGCAGATGCTGTGAGCAGCATGGTGTATGAAGCAAATGCCAGGATCAGAGACCCAGTTTATGGTTGTGCAGGAGCAATCTGTCAACTCCAAAAGCAAGTTAATGAGCTACAAGGACAATTGGCAAAGGCACAAGCTGAACTTGTCAACATGCAATGCCAGCAAACCAATTTAATTGCGCTGATTTGCATGGAAATGAGTCAATCTCAGGACCAGCACATGCTTCAGCCCCAACAAAATGTTGATATGAGCTGCTTCTTAGATGACAACAGCTTGGGATCAGCTTGGGAGCCTCTTTGGacatg 662 0.4834 MEFKVKAATSPPTIPIPLPTLLSKSPSSSSSLHSQSPPPFPSPSRSSPSAPLPPPPQSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVNELQGQLAKAQAELVNMQCQQTNLIALICMEMSQSQDQHMLQPQQNVDMSCFLDDNSLGSAWEPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02438 220 MobiDBLite consensus disorder prediction 20 35 - -
Bva03g02438 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 57 208 - -
Bva03g02438 220 Coils Coil 146 173 - -
Bva03g02438 220 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Bva03g02438 220 Pfam Lateral organ boundaries (LOB) domain 67 164 IPR004883 -
Bva03g02438 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 57 208 - -
Bva03g02438 220 MobiDBLite consensus disorder prediction 1 61 - -
Bva03g02438 220 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02438 Bva-Chr3 20720931 20722308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02438 63 220 AS2 family AT1G07900 70.552 8.26e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva03g02438 LOB 4.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02438 03 20720931 20722308 Bva03g02438 03 20720931 20722308 ECH