Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02426 ATGTCGGGCAGCTCAAGTTGCACTGTTTATATAGGCAATCTAGATGAGAGGGTGACCGACCGAGTCttgtatgatattttgattCAAGCAGGACGAGTGGTAGACCTGTACATTCCTAGGGACAAGGAATCTGAGAAACCCAAAGGCTTTGCTTTTGCAGAATATGAAACTGAGGAGATTGCAGACTATGCTGTCAAGCTTTTCTCTGGCCTTGTGATGCTCTACAAAAGAACTCTGAAGTTTGCGATATCTGGGCAAGACAAACCTACCTCGAATGGCTCAACAGCGATCACACCCATATCAAATTCTTCTCAGAGACCAAGGTCCTCAGTAAATAGTAATACGGAATTTTCCCAGCACTCTGCTAGGTTATCAACATCTGGCCGATTTTCTGAACATAATTATTCCCAAGTTTCCCCCCGTGTATTGGACCAATCTAGTGGGTATGGATCACACTTCAATGGCCACAATTATGATTACAGTCGAAGGGTTTTGGGGGCGACATTGGATAGCATTAGCCATTCTAGGTCCCGCCGCTATGATACAAGTAAACCAATCTCATATCCATCATCATACTA 578 0.4325 MSGSSSCTVYIGNLDERVTDRVLYDILIQAGRVVDLYIPRDKESEKPKGFAFAEYETEEIADYAVKLFSGLVMLYKRTLKFAISGQDKPTSNGSTAITPISNSSQRPRSSVNSNTEFSQHSARLSTSGRFSEHNYSQVSPRVLDQSSGYGSHFNGHNYDYSRRVLGATLDSISHSRSRRYDTSKPISYPSSY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02426 192 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 191 - -
Bva03g02426 192 Gene3D - 2 96 IPR012677 -
Bva03g02426 192 PANTHER OS01G0876500 PROTEIN 1 191 - -
Bva03g02426 192 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Bva03g02426 192 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 79 IPR000504 GO:0003723
Bva03g02426 192 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Bva03g02426 192 MobiDBLite consensus disorder prediction 86 137 - -
Bva03g02426 192 SMART rrm1_1 8 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02426 Bva-Chr3 20646951 20649819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02426 6 87 Eukaryotic Initiation Factors Gene Family AT1G49760 29.268 3.64e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02426 K12831 - gmx:100784532 285.804