Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02408 ATGACAGCAACCCATTTTCCTgagAGACCATCAATGGAGATGGAATCATCTGTTCCGCCAGGGTTTAGATTTCACCCAACAGAGGAAGAACTCGTGGAATATTATCTCAAGAGGAAGATCAATGCACTTAAAATTGATCTAGATGTTATTGTTGAGATCGATCTCTACAAAATCGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAATGAGTGGTACTTTTTCAGCCACAAAGATAAGAAGTATCCTACTGGAACAAGAACTAACAGAGCCACTGCAGCTGGATTCTGGAAAGCAACAGGGAGAGACAAGGCTGTGATGTCAAAGAAGAGAATCATAGGTATGAGGAAAACACTGGTTTTCTACAAAGGACGTGCTCCTAACGGCAGGAAAACAGATTGGATAATGCATGAATATCGCCTCCAGACATCTGAACATGGTCCTCCTCAGGCAAAAGGATGGGTGGTATGCCGAGCATTTAGAAAACCTAGTCCAAGTCAAAGACCAGGTTTTGAAGGTTGGAGCAATGAAGCACAGTATTTCAGAGAGCACAGTTATGCAAGAACGACATCATTTGCAGACATTTTACaagaaacatcaaataatttgCTTCATCCAACAGATCAAGGAACAAGTTTTAGTACTCATCAATCCTTTGTCTCGGATCAGCAGCAGTTTATTTTGAACCAGCAGCTGGTTGAGCTTCCACAGCTAGATAGTCCCACTGCAAGTTTGGCAGTAAAGGAAAATGGTAATGGATTAACAAAAAGTCATGAGGAAAGGAGCAATAGTAAGATTAATGGGCAATGTAGTATTGATTGGAAAAGCTTGGATAACTTGTTTGCATCACAGTTGACGGATACAGCAGCAGCTTTCTTCCCACATTCGAATTTGCCTATGATGTCCCATGCCCACCATAGTCATGACCTACAACAACAACTTCAAAATCAAGCTAGTCATCACATGTCTCATATCCTAGGATGCTTTCCTGACTTATA 1013 0.4077 MTATHFPERPSMEMESSVPPGFRFHPTEEELVEYYLKRKINALKIDLDVIVEIDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKKRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPPQAKGWVVCRAFRKPSPSQRPGFEGWSNEAQYFREHSYARTTSFADILQETSNNLLHPTDQGTSFSTHQSFVSDQQQFILNQQLVELPQLDSPTASLAVKENGNGLTKSHEERSNSKINGQCSIDWKSLDNLFASQLTDTAAAFFPHSNLPMMSHAHHSHDLQQQLQNQASHHMSHILGCFPDL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02408 337 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Bva03g02408 337 MobiDBLite consensus disorder prediction 1 20 - -
Bva03g02408 337 Pfam No apical meristem (NAM) protein 19 146 IPR003441 GO:0003677|GO:0006355
Bva03g02408 337 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Bva03g02408 337 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Bva03g02408 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 302 - -
Bva03g02408 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02408 Bva-Chr3 20548405 20551351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02408 14 336 NAC Transcription Factor Family AT1G71930 53.824 2.80e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g02408 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02408 - - gmx:100812904 447.973