Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02401 atgagttccACACAGAACAACTACCATCACAACGTGAACACACCCaccaaagaagaagatgaccAGGCTTGCATCTATGCCATGCTCTTGTCTAGTTTCCAAGTGTTACCAGCGATAGTGAATGCTGCAATTGAGCTCAACGTGTTTGATATTATTTCCCAGTTAACCCCATCTGGTGCTTATATCTCACCCTCTGAAATTGTACCTCACCTTCCAACAAAACACTCTCAATTAGTTGACAGGCTAGACAGAATGCTACGGGTGCTTGCTTCTTTCTCTGTTCTTGATTCCACCACACGCACCAACCAAGATGGCGAGTTTGAGAGGCTCTATAGGCTTTCACTCActggaaaatattttgtgcAGAACCAAGTTGAGAATctggctgcattctcaaacctCACCTGTCATCCAGCTCCAGTACAGGTTTGGTTGAACTTCAAGGAAGCAATTCTTAATGGTGGAACAGACCTGTTCAACAAAGTTCATGGGACACCCATATGGAAATACATGGAGAAGGACACAAAACTGAACCAAACATTCAACAGTGCAATGGCTGGAATATCAGCAGTGCAGATGAGGAAGTATTTGGAAGTATATGATGGATTTGAAGGAGTGTCAACATTAGTAGATGTTGGAGGAGGCACTGGTCAAAGTCTCCAAATGATTCTCTCCAAGCACCCTAATATAAACAAGGCTATTAACTTTGATTTACCTCAAGTCATACAGCATGCACCTCCCCATCCagGAATTGAGCATGTTGGAGGAAATATGTATGAAAGTGTCCCTAATGGTGATGCCATACTGATAAAGGCTACGTGCCATAATTGGCCAGATGACAAATGTGTAGCACTACTAAAGAACTGTTATAAATCACTTgctgaaaatggaaaagtgaTTATTTTGGACATGATCAttcttgaagaagaagagacatGTGTTCCTTCTCAGTATTTATCCATTATTGACAATACCATGTTCACTCAAGCTGATGGGAAGGAAAGAACCGAGAAAGAATTTGCCAAGTTGTGTAAAGACTCTGGTTTCTCAAGCTGTCGAGTTGTTGCTCGTGCTCTTTCAGTTTATGGAGTCatagaattttataagta 1109 0.3733 MSSTQNNYHHNVNTPTKEEDDQACIYAMLLSSFQVLPAIVNAAIELNVFDIISQLTPSGAYISPSEIVPHLPTKHSQLVDRLDRMLRVLASFSVLDSTTRTNQDGEFERLYRLSLTGKYFVQNQVENLAAFSNLTCHPAPVQVWLNFKEAILNGGTDLFNKVHGTPIWKYMEKDTKLNQTFNSAMAGISAVQMRKYLEVYDGFEGVSTLVDVGGGTGQSLQMILSKHPNINKAINFDLPQVIQHAPPHPGIEHVGGNMYESVPNGDAILIKATCHNWPDDKCVALLKNCYKSLAENGKVIILDMIILEEEETCVPSQYLSIIDNTMFTQADGKERTEKEFAKLCKDSGFSSCRVVARALSVYGVIEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02401 369 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Bva03g02401 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Bva03g02401 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 369 - -
Bva03g02401 369 PIRSF O-mtase 4 369 IPR016461 GO:0008168
Bva03g02401 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Bva03g02401 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 367 IPR029063 -
Bva03g02401 369 CDD AdoMet_MTases 208 301 - -
Bva03g02401 369 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Bva03g02401 369 Gene3D - 3 120 IPR036388 -
Bva03g02401 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Bva03g02401 369 PANTHER O-METHYLTRANSFERASE 2 369 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02401 Bva-Chr3 20506739 20509375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02401 14 369 Monolignol Biosynthesis Gene Families AT5G54160 44.413 2.59e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02401 - - gmx:100787536 398.667