Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02398 ATGTCCTTCAATAGGTTATCAGGGAATATTGTGTCACAGTTAGTTGAACTGGAGAGTctcaaaagtttaaatcttAGCGCCAATAAGTTTATTGGGTCTCTTCCTACCAGCCTGGGGAAGAACATAGTTTTGAAGGAGCTTGTGCTCTCTACGAATGTTTTTCATGGTGTAATCCCAGAGGAAATATTGAGTTATACAAATTTGACTATGATTGATCTTAGTGCTAATAGTCTTATAGGGCATGTTCCTAATGATATTGGAAATCTTTCcaaattggaaattttgattctttcctCTAATATGTTCAACGGGGAAATCCCAAAAACTCTCGTAAACATCAGAACCCTCACACGTTTTGCTGCAAATCAGAACGACTTTTTTGGTGCCATTCCTCCTGGAATAACACGATTTCTCAGAACTTTGGATCTTAGTTATAATAGTTTGTCTGAGACTATTCCAACAGACCTTCTGTCATCACCAAAATTGGTGTCTGTAGATTTGTCCTATAATCATTTATCTGGTCCATTGCCTGCAACCATTTCTTCTAGCCTAGTCAGGTTGAGATTAGGGGGTAATTCGCTAAATGGGACAATCCCTCCAGTTTCTTTGGCACTGCTTAAGAATTTGACGTACATGGAGCTGGAAAGCAATAACTTGACAGGATTGATACCACATGAACTGGGTTCATGCAGAAAATTGGCATTGTTGAATTTGGCTCAGAATGGATTGGGTGGTGAATTGCCTGCAGAGCTCGGTAGTCTTGGTGATCTTCAAGTCTTGAAGCTTCAAATGAACAACTTTTCTGGACCAATACCAATTCAAATTTCCCAATTACAGAATTTGTCAATGCTGAACTTGAGCTCAAATTCTCTAGATGGGTCAATTCCATctgaaatatcaaatttgaCAAAGCTTACTAACCTGAATTTGCAAGGAAACAAACTGAACGGTTCTATTCCAACCTCAATCAGCAGCTTGACAAATCTCATGGAACTCCAACTTGGGGGAAACCAGCTAAGTAATGACATTCCAAAAATGCCAGTGAATCTACAGATTGCCTTGAATCTCAGTAGCAACCGCTTTAAAGGACCTATTCCTATCAGCTTTGGTGACTTGACCAGTCTAGAAGTCTTGGATCTTTCGAATAACCAATTTTCTGGTGAAATTCCTCAGTCCCTAACTAAATTGCAAGCTTTGACACGGTTGGTGCTTTCTAATAATCAACTATCTGGTGTCATACCTAAATTTTCTTCATGGGTTAAAGTTGAACCAGGTGGAAATAAAGATCTCAGAAATGATACAGTTCATGACACGCAACATCAATCAACAAAGGGAAAATCTGTTGTTGTGGCAGTTCTTGTTGCAATTGCAGCAGCTGTTTTTGTTGTCGGTGTGATTGCTCTGCTGGTTGTATCAATCTCACGACACTATTACAGGGTTAATGATGAAAACTTGCACTCAGGTGAGAATCTTCACCCTCCTCAGGTTGTCCAAGGCAATCTGTTTACTCCCAATGGAATCCACAGATCAAACATTGACTTCTCCAAAGCCATCGAAGCTGTTGGTGAAACATCAAATATTACTCTGAAAACTAGGTTCTCAACTTACTACAAAGCTGTCATGCCATCTGGAGCAACCTACTTTGTAAAGAAGCTCAACTGTGGTGACAAGATTTTCCCACTGGGTAGTCATGATAAATTTGCAAAAGAGCTAGAGTTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTAGCATATGTTCTATCCACTGATAGTGCCTACATACTCTATGAATTTGTCTCAAATGGCTCCCTTTTTGATGTTTTTCATGGAAGCATGAGTAATTCATTAGATTGGGCTAGCAGATATTGCATAGCTGTCGGTGTAGCTCAAGGTCTCTCTTTTCTGCATGGATATGCCTCTGGTCCAATACTTCTCCTAGATCTGTCAAGCAAAAATATCATGTTGAAGTCCCTCAAGGAGCCTCTTGTTGGAGACATAGAACTCTATAAGGTGATTGATCCCACAAAGAGCACAGGAAGCTTTTCGGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCTTACACTATGAGAGTAACAATGGCTGGAAATGTCTACAGCTTTGGGGTGATTCTGCTCGAATTGCTAACAGGAAAACCAGCAGTAACTGAGGGAACTGAATTGGTCAAGTGGGTCATGCGCTACTCAACAAAGCAGGATCACATTCTTGATTCTAATGTCAGTAGAACATCAGAGGCTGTTAGAAATCAAATGCTTGCGGTCCTTAAGATTGCTCTTACTTGTGTTAGCCTATCGTCAGATACAAGACCAAAGATGAAGAGTGTGCTGCGGATGCTCTTGACTGCAAGATA 2387 0.3955 MSFNRLSGNIVSQLVELESLKSLNLSANKFIGSLPTSLGKNIVLKELVLSTNVFHGVIPEEILSYTNLTMIDLSANSLIGHVPNDIGNLSKLEILILSSNMFNGEIPKTLVNIRTLTRFAANQNDFFGAIPPGITRFLRTLDLSYNSLSETIPTDLLSSPKLVSVDLSYNHLSGPLPATISSSLVRLRLGGNSLNGTIPPVSLALLKNLTYMELESNNLTGLIPHELGSCRKLALLNLAQNGLGGELPAELGSLGDLQVLKLQMNNFSGPIPIQISQLQNLSMLNLSSNSLDGSIPSEISNLTKLTNLNLQGNKLNGSIPTSISSLTNLMELQLGGNQLSNDIPKMPVNLQIALNLSSNRFKGPIPISFGDLTSLEVLDLSNNQFSGEIPQSLTKLQALTRLVLSNNQLSGVIPKFSSWVKVEPGGNKDLRNDTVHDTQHQSTKGKSVVVAVLVAIAAAVFVVGVIALLVVSISRHYYRVNDENLHSGENLHPPQVVQGNLFTPNGIHRSNIDFSKAIEAVGETSNITLKTRFSTYYKAVMPSGATYFVKKLNCGDKIFPLGSHDKFAKELEFLAKLNNSNVMTPLAYVLSTDSAYILYEFVSNGSLFDVFHGSMSNSLDWASRYCIAVGVAQGLSFLHGYASGPILLLDLSSKNIMLKSLKEPLVGDIELYKVIDPTKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVMRYSTKQDHILDSNVSRTSEAVRNQMLAVLKIALTCVSLSSDTRPKMKSVLRMLLTAR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02398 795 ProSiteProfiles Protein kinase domain profile. 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02398 795 Gene3D Ribonuclease Inhibitor 289 350 IPR032675 -
Bva03g02398 795 ProSiteProfiles Leucine-rich repeat profile. 374 397 IPR001611 GO:0005515
Bva03g02398 795 Gene3D Ribonuclease Inhibitor 351 439 IPR032675 -
Bva03g02398 795 Gene3D Ribonuclease Inhibitor 181 288 IPR032675 -
Bva03g02398 795 SUPERFAMILY L domain-like 2 131 - -
Bva03g02398 795 Pfam Leucine rich repeat 354 409 IPR001611 GO:0005515
Bva03g02398 795 Pfam Leucine rich repeat 257 315 IPR001611 GO:0005515
Bva03g02398 795 SUPERFAMILY Protein kinase-like (PK-like) 533 791 IPR011009 -
Bva03g02398 795 PRINTS Leucine-rich repeat signature 138 151 - -
Bva03g02398 795 PRINTS Leucine-rich repeat signature 372 385 - -
Bva03g02398 795 Gene3D Phosphorylase Kinase; domain 1 508 601 - -
Bva03g02398 795 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 792 - -
Bva03g02398 795 Pfam Protein tyrosine and serine/threonine kinase 563 790 IPR001245 GO:0004672|GO:0006468
Bva03g02398 795 Gene3D Transferase(Phosphotransferase) domain 1 602 795 - -
Bva03g02398 795 SUPERFAMILY RNI-like 106 412 - -
Bva03g02398 795 PANTHER F12K21.25 1 792 - -
Bva03g02398 795 Gene3D Ribonuclease Inhibitor 1 180 IPR032675 -
Bva03g02398 795 SMART LRR_typ_2 278 301 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 206 230 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 372 395 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 135 159 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 396 418 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 89 113 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 17 41 IPR003591 -
Bva03g02398 795 SMART LRR_typ_2 302 326 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02398 Bva-Chr3 20492302 20496012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02398 5 791 Receptor kinase-like Gene Family AT2G41820 39.659 4.09e-157 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva03g02398 PK_Tyr_Ser-Thr 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02398 - - cit:102626967 980.704