Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02393 ATGGAAGATTCAGAGGAAGAGGAGTTTCTGAATCTTAGCCTTTCAGTTGCTTCTAatagggagaagaaaaagaaagggaagatAATAATGAGGGATCATGCTTCTATGAGCCCTATGATGAACTCCTATGAAGGGAAGATCTTTAGGCTTCTCCAAATGAGGGAGCAGATGCTAAGACAAGAGCTCCAAAGAAGGAAAGGAGTTGTTGAAGATGGCAATGGCCTACCTTTGATCCATTTGCTTCTCACAACAGCCACTGCAGTTGATGAGAACAACTTGGGTTCTGCCTTGGAGAATCTCACAGAACTTTATAAAACAGTTTCCTTAACAGGAGACTCAGTTCAAAGGGTGGTGGCCTATTTTGCTGATGGCTTGGCTGCTAGGCTTCTCACAAGGTCATCTCCATTCTATGACATGCTCATGGAGGAACCCACATGTGAAGAAGAGTTTCTAGCATTCACAGATCTCTACAGGGTCTCACCCTATTACCAATTTGCTCACTTCACTGCAAATCAGGCAATTCTAGAGGCTtttgagaaggaagaagagaagaacaaCAAAGCACTACATGTCATTGACTTTGATGTCTCTTATGGCTTCCAATGGCCTTCACTTATTCAGTCACTTTCTGAGAAAGCAACCAGTGGCAACAGAATATCTTTAAGAATCACAGGATTTGGAAAGAGCTTGAAAGAGATGCAAGAAACCGAGTCTAGGTTGGTTAGCTTCTCAAAGGGTTTTGGCAATCTTGTGTTTGAGTTCCAAGGGCTTCTAAGAGGGTCAAGGGTGATCAAcctaaggaaaaagaagaatgaaacaGTGGCGGTGAACTTGGTTTCTTATTTAAACACTTTGAGTAGTTTTATGAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAATCCCTCCATTGTAGTGTTGGTAGAACAAGAAGGTAGCAGGAGTCCTAGGACCTTCTTGTCAAGATTCACAGACTCTTTGCACTATTTTGCAGCCATGTTTGATTCATTGGATGATTGTCTGCCATTGGAAAGCACAGAGAGGCTAAGGATTGAGAAGAAGCTGTTGGGCAAAGAGATCAAAAGCATGCTCAACTATGACATGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAACATGGAAAGCAAGAATGGAAAGTCATGGGTTTGCAGGAACCAAGATAAGCTCAAAGTCTATGATCCAAGCAAAACTGCTGTTGAAGATGAGAACCCATTACTGTCCATTGCAATTTGAAGCAGATGGAGGTGGTGGTTTCAGGGTTTCTGAAAGGGATGAAGGAAGGGCCATCTCTTTGGGATGGCAAAATAGGTTTCTGCTTACAGTCTCAGCATGGCAACCAGTGTTCTG 1376 0.4055 MEDSEEEEFLNLSLSVASNREKKKKGKIIMRDHASMSPMMNSYEGKIFRLLQMREQMLRQELQRRKGVVEDGNGLPLIHLLLTTATAVDENNLGSALENLTELYKTVSLTGDSVQRVVAYFADGLAARLLTRQF 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02393 134 ProSiteProfiles GRAS family profile. 68 134 IPR005202 -
Bva03g02393 134 PANTHER OSJNBA0084A10.13 PROTEIN 7 132 - -
Bva03g02393 134 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 132 IPR005202 -
Bva03g02393 134 Pfam GRAS domain family 77 131 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02393 Bva-Chr3 20465837 20466362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02393 74 130 GRAS Transcription Factor Family AT1G50420 47.368 1.23e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva03g02393 GRAS 2e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02393 - - gmx:100813979 174.481