Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02390 ATGGAGGTTACCAAAGCCCACAACCACACTCCTAGGGAGCCCTCTTCTCTTAAGCTGGAGGCACAAGCTCCGGCAACCCCAAGCCCCCTCCGGAAGATCATTGCCGTGGCTTCCATTGCCGCCGGTATCAATTTCGGGTGGGCCATTCAGCTTTCTTTGTTAACCCCATATGTCCAACTGCTTGGCATCCCACACAAGCGTGCTTCTCTAATTTGGCTCTGTGGACCCATTTCCGGCATGATTGTTCAACCCATCGTCGGTCACCATAGTGACCGCTGTAAATCCAGCTTCGGCCGTCGCCGCCCTTTCATAGTTGCGGGTGCTGTCTCTGTGGTCGTCGCCGTCTTCCTCATTGGTTACTCCGCCGACCTCGGCCACATGTTTGGTGATTCCCTTCAGAAAAAAGCTCGTCCCCGCTCCATCGCCATCTTCGTACTCGGATTCTGGATTTTCGACGTTGCCAACAACATGTTACAAGGGCCGTGCCGGGCTTTCCTCGCCGACCTCTCCGGCAGCGACCATCGTAAGATGCGAACCGCCAACGCTTTCTTCGCCTTCTTCATGGCCGTTGGCAACGTCCTGGGATACGCCGCCGGCTCCTACAATGGCCTCCATAACGTGTTCCGCTTCACCAAAACAAGAGCTTGTGATGTTTACTGTGCCAACCTCAAGAGCTGCTTCTTCATCTCCGTCACTTTGCTCTCTGTGCTCGCCACTCTAGCTCTTATCTATGTCAAAGAGAATACGCAACAGGTACCGGGAAATGCCGGTGACGACGACGCAGACCTGCAGGTAGAGAAATCAGGCGGGATACAGTGTTTCGGGCAATTATTCGGTGCTTTTCGGGAGTTGAAGAGACCGATGTGGATCCTGCTCTTGGTGACGTGTCTTAACTGGATTGCTTGGTTTCCCTTCATCTTAATGGACACGGATTGGATGGGGAGGGAGGTGTACGGCGGGAAAGTTGGGGAGGAAATTTATGCAACAGGAGTACGCGTCGGCACACTGGGGCTGATGCTTAACTCCGTGGTGCTTGGAGTCGTGTCGTTGAGTGTGGAGGTTTTGGCGCGCGGAGTTGGTGGAGTGAAAAGGTTATGGGGAATCGTCAATTTCTTGTTGGCTGTTTGCATGGCAATGACGGTTTTGATATCAAAGTTGGCCGACCACTCACGCCGATACGCCGCCGTCCACGGTGGTCATGCCGATGCTCTGCCGCCGTCTGAAGGGATCAAAGCCGGTGCCTTGACCCTCTTTGCGGTGCTGGGTATACCTCTTGCGATTACTTACAGTATCCCATTTGCTCTAGCATCTATCTTTTCAAGCACCTCAGGCGCCGGccaagGGCTTTCCTTGGGAGTTCTGAACCTTGCAGTGGTCGTCCCACAGTTTGTGGCGTCTCTGGCAACTTCACCATTTGATGGTCTATTTGGAGGTGGAAACTTGCCGGCATTCGTGGTGGCATCCTTGGCTGCACTAGCCAGTGGCATATTATCGGTCACCCTGCTGCCATCACCGCCGCCAGATATGGCCAAGGCTGCAGCTGTTGCTGGGGGCTtccatta 1562 0.5397 MEVTKAHNHTPREPSSLKLEAQAPATPSPLRKIIAVASIAAGINFGWAIQLSLLTPYVQLLGIPHKRASLIWLCGPISGMIVQPIVGHHSDRCKSSFGRRRPFIVAGAVSVVVAVFLIGYSADLGHMFGDSLQKKARPRSIAIFVLGFWIFDVANNMLQGPCRAFLADLSGSDHRKMRTANAFFAFFMAVGNVLGYAAGSYNGLHNVFRFTKTRACDVYCANLKSCFFISVTLLSVLATLALIYVKENTQQVPGNAGDDDADLQVEKSGGIQCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFILMDTDWMGREVYGGKVGEEIYATGVRVGTLGLMLNSVVLGVVSLSVEVLARGVGGVKRLWGIVNFLLAVCMAMTVLISKLADHSRRYAAVHGGHADALPPSEGIKAGALTLFAVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAVVVPQFVASLATSPFDGLFGGGNLPAFVVASLAALASGILSVTLLPSPPPDMAKAAAVAGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02390 520 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 14 512 - -
Bva03g02390 520 SUPERFAMILY MFS general substrate transporter 31 506 IPR036259 -
Bva03g02390 520 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g02390 520 Pfam MFS/sugar transport protein 39 301 - -
Bva03g02390 520 Gene3D MFS general substrate transporter like domains 30 252 IPR036259 -
Bva03g02390 520 PANTHER SUGAR TRANSPORTER 14 512 - -
Bva03g02390 520 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 507 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bva03g02390 520 CDD MFS_SLC45_SUC 33 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02390 Bva-Chr3 20426066 20428284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02390 19 520 Sucrose Transporter Gene Family AT1G71880 64.706 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02390 K15378 - gmx:547679 733.021