Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02380 ATGGCACTTCCGTCGACTCTGGTGGCAGATTCCAGTTTCACTCCACTGGTATTCTCCGCCTTGTTAATGCGTCCGACGCCGCCGTCTGGGATTCCGGCACTTCCAATTTGGGAGTCTCCTCTGTTTTTCTTAGAGACGACGGCAACTTGGCTCTCTCAAATGGCTCCTCCACCGTCTGGTCAACGAAATCTCACCCTTACATGGAATAGTAGTATAGTGTACTGGAATCAAGGTCTCAATTCTTCAGTGAATGCAATATTGAAATCCCCAGTTTTAAAATTGCAATCAATAGGGATTTTGCAACTTTTGGGTACGAATTTGACAGGTGCAGTGATTGTTGCTTATAGCAGTGACTACGCTGAAGGTGATGTACTGAGAACATTGAAGTTCGATAGTGATGggaatttaagaatttatagCAATTCTAGAGGTACTGGAACTTCAACAGCAAGATGGGCTACAGTTCAAGATCAATGTAAGGTTTTTGGTTTCTGTGGGACTAATGGAATTTGTAGTTACAATGATTCTAACCCAGTTTGCGGGTGCCCGTCTCAGAATTTTGAGATGATTGATCCAAATGATAGCAGGAAAGGGGGGAATTGTCTTGCAGGTTCTTGTTTTGCTTCCACTTCATTGTCAGATGGTACAGGACAATGTTACATAAAGACATCACATTTTATAAGTGGATATCAGAGTCTAGCACTGCCTAGCACCTCTTATGTGAAGGTTTGTGGGTGGTGGCTCCAAACCCACCACCCACGTGGGAAGAGATGGGGGGTACCTGCTTGGGTTGTGGTGGTAGTCATTTTGAATACCCTTTTAGGTTTGATGGTCTTAGAAGGTGGTTTATGGTTGTGGTGTTGTAGGAACAACAAGAGATTTGGTAGATTGTCAGCACAGCTTACCCTGCTGGAGTATGCTTCTGGTGCACCAGTCCAGTCCTCATATAAGGAGCTTCAGCGCTCTACAAAGGGATTCAAGGAGAAGCTTGGAGCTGTGTATAGAGGAACTCTTGCTAATAAAACTGTTGTTGCAGTAAAGCAACTTGAGCAAGGTGAAAAGCAGTTTAGGATGGAAGTTGCTACTATAAGTAGCACCCATCATCTGAATCTGGTGAGATTGATTGGTTTTTGCTCACAAGGGCGTCACAGGCTATTAGTCTATGAGTTCATGAAAAATGAGTCTCTTGATAAATTCCTCTATGGGAATGAAGAACAATCAGGAAAATTGTTGAGTTGGCAGTATCGATTCAACATTGCCTTAGGCACTGCAAGGAGCATCATGTATCTTAACGAAGAATGCTTACAAACTAACAAAGCTGGAATACTTTCATCTCGTCCTCGATCGTCAAGAATGGAGAATCTCCAGCAGATGCATTCTTACTTCGATGAGTCCTA 1397 0.4295 MALPSTLVADSSFTPLVFSALLMRPTPPSGIPALPIWESPLFFLETTATWLSQMAPPPSGQRNLTLTWNSSIVYWNQGLNSSVNAILKSPVLKLQSIGILQLLGTNLTGAVIVAYSSDYAEGDVLRTLKFDSDGNLRIYSNSRGTGTSTARWATVQDQCKVFGFCGTNGICSYNDSNPVCGCPSQNFEMIDPNDSRKGGNCLAGSCFASTSLSDGTGQCYIKTSHFISGYQSLALPSTSYVKVCGWWLQTHHPRGKRWGVPAWVVVVVILNTLLGLMVLEGGLWLWCCRNNKRFGRLSAQLTLLEYASGAPVQSSYKELQRSTKGFKEKLGAVYRGTLANKTVVAVKQLEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMKNESLDKFLYGNEEQSGKLLSWQYRFNIALGTARSIMYLNEECLQTNKAGILSSRPRSSRMENLQQMHSYFDES 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02380 465 PANTHER OS07G0415500 PROTEIN 62 199 - -
Bva03g02380 465 ProSiteProfiles Protein kinase domain profile. 319 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02380 465 Gene3D Transferase(Phosphotransferase) domain 1 307 458 - -
Bva03g02380 465 SUPERFAMILY Protein kinase-like (PK-like) 313 434 IPR011009 -
Bva03g02380 465 Pfam Protein tyrosine and serine/threonine kinase 330 433 IPR001245 GO:0004672|GO:0006468
Bva03g02380 465 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 62 199 - -
Bva03g02380 465 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 200 435 - -
Bva03g02380 465 Pfam S-locus glycoprotein domain 108 183 IPR000858 GO:0048544
Bva03g02380 465 PANTHER OS07G0415500 PROTEIN 200 435 - -
Bva03g02380 465 SMART tyrkin_6 326 462 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02380 Bva-Chr3 20367307 20368909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02380 315 437 Trihelix Transcription Factor Family AT4G32710 44.776 6.27e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva03g02380 PK_Tyr_Ser-Thr 2.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02380 - - gmx:100795819 519.62