Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02376 ATGGACGAGCGAGGAGCGTCCACCAAAAATGTCCGCAGTTGGAGCAAGAATACCGAATACCACTCCGCTGCTCAACAACGCCAACTAAACACAGCGACTTCCTTATCAGTACAGCTGGGAAACGTCAACTGTAGGCGCCCTCGGAGCCACCGGAAATCGGCCATGGCCGCTTCTTCCTCCGGCAATTCCTTGCCAACTTCTTCCTCAGCTCCCTCTCACAAACCGTTGGATTTCTCGCCGGATTATCCACCCAGAATCGCTCTCTCACCCGATCAGATGAAGTACTGCTCTGAAGCACTTGGATTCTTTAAGAGGAAGACACCCCAggagatcagtcaagagtttGCTCGTTTACAGGCGAATAGGATAACACCAAATGAGATGAGGAGAAGATGTGTTGTAGCTCTGAACAGCGTAAATGAGAACAAAAATCGTTACACAGATGTCGTACCatttGACAACAATAGGGTTGTTCTCCAATCAAGTACAGATTATAGACCCACAGCACAGGGCTATATCAACGCAAGCCTCATTTCGACTTCTTCCTCTGGAAGTGTTTCTCGGTTTATAGCTACACAAGGCCCGTTACCTCACACGTACGAGGATTTCTGGGAAATGGTTATGCAATATCACTGCCCAGCAATTGTAATGCTTACTAGGTTGGTGGACCATTACAAGCTGGTAAAGTGTGGAGATTATTTTCAAGCTGAAGATGGAGCTAGAGAATTTGGTAATATATCTATTATCACTAAATGGATGGAAGCTACTGATACTTCTCTGGTGCTACGCCACTTGGAGGTGAAGCATAAAGAGCCAGAAGACCCGCCGTTATCTGTTCTTCATATTCAGTACCCTGAGTGGCCTGATCATGGAGTTCCCAAAGATACATCTGCTGTGcgtgaaattttgaaaagattatGCCATTTACCACCAAATCTTGGTCCAATAGTGGTGCACTGCAGTGCAGGTATTGGGAGAACTGGAACATACTGCACAATACACAACACAATTCAGAGAATCCTTGCTGGTGATATGTCTGCTTTGGATATTGATAATACTGTAGCTGTATTTAGGTCCCAGCGTATTGGAATGGTTCAAACAGAGGACCAGTATCTTTTCTGCTACAAAACTATCATAGAAGAATTGGAAGACCTCGTATCTTATCAGCAATTAGAGGAGAATGCACGATG 1190 0.4395 MDERGASTKNVRSWSKNTEYHSAAQQRQLNTATSLSVQLGNVNCRRPRSHRKSAMAASSSGNSLPTSSSAPSHKPLDFSPDYPPRIALSPDQMKYCSEALGFFKRKTPQEISQEFARLQANRITPNEMRRRCVVALNSVNENKNRYTDVVPFDNNRVVLQSSTDYRPTAQGYINASLISTSSSGSVSRFIATQGPLPHTYEDFWEMVMQYHCPAIVMLTRLVDHYKLVKCGDYFQAEDGAREFGNISIITKWMEATDTSLVLRHLEVKHKEPEDPPLSVLHIQYPEWPDHGVPKDTSAVREILKRLCHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSALDIDNTVAVFRSQRIGMVQTEDQYLFCYKTIIEELEDLVSYQQLEENAR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02376 396 ProSitePatterns Tyrosine specific protein phosphatases active site. 318 328 IPR016130 GO:0016311|GO:0016791
Bva03g02376 396 SMART PTPc_3 110 383 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 277 294 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 348 363 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 315 333 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 364 374 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 189 209 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 PRINTS Protein tyrosine phosphatase signature 171 178 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 Gene3D Protein tyrosine phosphatase superfamily 92 384 IPR029021 -
Bva03g02376 396 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 62 392 - -
Bva03g02376 396 MobiDBLite consensus disorder prediction 10 43 - -
Bva03g02376 396 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 293 372 IPR000387 GO:0016311|GO:0016791
Bva03g02376 396 MobiDBLite consensus disorder prediction 1 84 - -
Bva03g02376 396 SMART ptp_7 278 380 IPR003595 -
Bva03g02376 396 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 62 392 - -
Bva03g02376 396 Pfam Protein-tyrosine phosphatase 140 380 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 ProSiteProfiles PTP type protein phosphatase domain profile. 111 381 IPR000242 GO:0004725|GO:0006470
Bva03g02376 396 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 82 385 IPR029021 -
Bva03g02376 396 MobiDBLite consensus disorder prediction 53 74 - -
Bva03g02376 396 CDD PTPc_plant_PTP1 172 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02376 Bva-Chr3 20338281 20343023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02376 91 387 Protein tyrosine phosphatase (PTP) family AT1G71860 70.234 1.25e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02376 - - gmx:548044 505.753