Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02365 ATGGAAAAAGCACTTCCCCCATTGATCTTCAAGAACCCCATTAGAAGAACCTCGAAAGGATCTTCAAAGTATCTTGGGGTCAGAAGAAGGCCATGGGGAAGATATGCTGCTGAAATCAGGAATCCATATACCAAAGGAAGACATTGGCTGGGCACATTTGACACTGCTGCCATTGCTTATGATCTTTCTTCCATTAACATTTGTGGCATGGAGAATGCCCGTACAAATTTCCATTACCCTATGATATCCctaccaccaccaccacttcCTCCTCCTTATCGATTGCCACCGCCGGCACAACCTATGGCAGAGTTGGAAGTAAGTGATGTTTGTGCAGAGATGATCAATGCTGTTGATGAGGGAGATCATGAGTCTTTGGTTATTGCTTCCATCTTACAAAGTTTTTCTTATCCTGGTAGttgttttttcta 431 0.4037 MEKALPPLIFKNPIRRTSKGSSKYLGVRRRPWGRYAAEIRNPYTKGRHWLGTFDTAAIAYDLSSINICGMENARTNFHYPMISLPPPPLPPPYRLPPPAQPMAELEVSDVCAEMINAVDEGDHESLVIASILQSFSYPGSCFF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02365 143 ProSiteProfiles CUT domain profile. 1 65 IPR003350 GO:0003677
Bva03g02365 143 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 1 134 - -
Bva03g02365 143 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 134 - -
Bva03g02365 143 Coils Coil 143 143 - -
Bva03g02365 143 ProSiteProfiles AP2/ERF domain profile. 23 78 IPR001471 GO:0003700|GO:0006355
Bva03g02365 143 Gene3D AP2/ERF domain 22 79 IPR036955 GO:0003700|GO:0006355
Bva03g02365 143 Pfam AP2 domain 22 59 IPR001471 GO:0003700|GO:0006355
Bva03g02365 143 CDD AP2 22 77 IPR001471 GO:0003700|GO:0006355
Bva03g02365 143 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Bva03g02365 143 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bva03g02365 143 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bva03g02365 143 SMART rav1_2 23 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02365 Bva-Chr3 20275445 20275876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02365 9 79 AP2-EREBP Transcription Factor Family AT1G12890 59.494 3.53e-23 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g02365 AP2 9.6e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02365 - - gmx:100816937 177.563