Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02348 ATGACTGTGGCCACGGATTCTTCACCGGAGTGTTTCAGCAAGGCGAAGGCTTGGCTGCCGGGATTTCGGTTCCATCCTACCGATGAGGAGCTggttttgtattatttgaagaagaagatgtgTAGGAGGAAGCTTAGGGTCAATATCATTGCTGAGACTGATGTATACAAGTGGGATCCTGAGGAGTTGCctgGGCAATCTATACTGAAAACTGGAGATAGGCAGTGGTTCTTTTTCAGTCCTAGGGATAGAAAGTATCCCAATGGTGCAAGGTCCAATCGAGCAACTAGACATGGATATTGGAAAGCAACAGGAAAGGACCGTAATGTGACGTGCAATTCTCGGACAGTTGGACTGAAAAAGACTCTGGTTTTCCATAAAGGAAGAGCACCTAATGGTGAGCGAACTGATTGGGTAATGCATGAATACACCTTAGATGAAGAAGAACTTAAAAGATGTCAGGGTGTTCAGGACTATTATGCACTTTACAAGGTATACAAGAAGAGTGGACTTGGTCCAAAAAATGGTGAACAGTATGGTGCACCATTTAAAGAAGAAGAGTGGGCAGATGATGATTTTGTAGAATGCAATATCACTTCAACTGATGAGGAGGATCTGACTCGGCAACCTGATGCTGTGGTTACTTCTTTAGATACTGTCACAGTTAATGCCAATAAAGAGATCAtgagaaaaattttgtatgatgaTCCTGTCCCTGACCAGCTACAGGTGCCTGGTTGTCCTCCAGCATTATCTCAGGTTTTTGCTGGAGAAACACAAACTGCCGTGGTGGATCAATTCTGTCTTGAGCCAATCACAACATTTGATCCCAGCACTGATCAATGTCATTTACAGCCCAGCTATGACTTCACTCAGTCGGCTATTTCTCAAGTACATGTGTCTGAATCACCTGAGGTCACCTCTACTCCtcaaaatcaagaaaagtTGCCTCTCCTTAACGAGGAAGACTTTTTGGAAATTGATGATCTCCTTGGTCCTGAACTCGCATTTTCAAACATGGATAAACCATTGGACAATCTACAGTTCGAAGATGGATTAAGTGAATTTGACCTGTTTCACGATGCAGCCATGTTTTTCCAAGAAATGGGACCAATTGATCAGGAAAATTCTTTTCCACACCCACATATGAATACCCTTGGGGGGAATCTTGTAAATCAGGATTTTCAGTTGCTACCCTATCCAGAGGGTGTGACCGAGGCAGCCAGTGAGCTCTGGATGCATGATCAGGGAAGAGATGTTGTGTGTCCATCAGAGCAAAGTGACGTTTCTTTCTCTCTACCAACCTCAGGTGTTCCATATGATTCTGCGATTGTCCCCGCTAGAGGCAATCAAAATAGCACCGTGGAAGATGGTGCTACAAGTATATTCTCTTCTGCTCTCTGGTCCTTTGTGGAGTCCGTACCTACCAGTCCTGCATCCGCGTGTGAAGGTGCTTTGGTGAATCGGGCTTTTGAACGGATGGCTAGCTTCAGCAGGCTGAGAATCAATGCCAAGTGCTCAAATGCTGTTGCAGGCATTCATAACAGTGACAGTGGAAAGCATAAAGTTGGACGTTG 1577 0.4318 MTVATDSSPECFSKAKAWLPGFRFHPTDEELVLYYLKKKMCRRKLRVNIIAETDVYKWDPEELPGQSILKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRNVTCNSRTVGLKKTLVFHKGRAPNGERTDWVMHEYTLDEEELKRCQGVQDYYALYKVYKKSGLGPKNGEQYGAPFKEEEWADDDFVECNITSTDEEDLTRQPDAVVTSLDTVTVNANKEIMRKILYDDPVPDQLQVPGCPPALSQVFAGETQTAVVDQFCLEPITTFDPSTDQCHLQPSYDFTQSAISQVHVSESPEVTSTPQNQEKLPLLNEEDFLEIDDLLGPELAFSNMDKPLDNLQFEDGLSEFDLFHDAAMFFQEMGPIDQENSFPHPHMNTLGGNLVNQDFQLLPYPEGVTEAASELWMHDQGRDVVCPSEQSDVSFSLPTSGVPYDSAIVPARGNQNSTVEDGATSIFSSALWSFVESVPTSPASACEGALVNRAFERMASFSRLRINAKCSNAVAGIHNSDSGKHKVGR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02348 525 SUPERFAMILY NAC domain 17 168 IPR036093 GO:0003677|GO:0006355
Bva03g02348 525 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Bva03g02348 525 PANTHER NAC TRANSCRIPTION FACTORS 2 2 511 - -
Bva03g02348 525 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Bva03g02348 525 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 511 - -
Bva03g02348 525 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02348 Bva-Chr3 20147886 20153288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02348 6 515 NAC Transcription Factor Family AT1G34190 46.545 3.97e-139 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g02348 NAM 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02348 - - pper:18766522 583.563