Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02342 ATGGATTTCAGAGATGGTTTTGTATCCAATGAGCACCTTGAGCTTCATAGGTCTGCATCAGAAAGTGCTGATCCATCAACTGTTTCTCCACTGCAAATTAGTCCTAAGTCACCGAAGTCCCCAAGGGTCCATGGCAAGTTAAACAAGCAAAGTCCAAAGCATGGAAGGCAATTATGTTCTCCAAAAGATGGACGTCCAAAGAAAGGTGGTTCTGGGGGTAAAGGCACATGGGGAGGATTGCTTGATACAGATGACAAGAACTTTCTAGACCCCAGTGATCCAAATTACGATAGCAGTGAGGAATGTGAACATTCAAATGACACCAAGACAAAGGATATGGAGAGCTACAAGAAGAAAGCTACAGTTATAGTGGAGGAATACTTCGCCACTGATGATACacgacaaagaaaagaaatggctgCTGTTCTTTTATCTGCACTATATGCTGACACCATTGATCCATCACAAATATACAAAGGTTTCAGCAAATTAGTTGAATCTGCAGATGACTTGATTGTAGATATTCCAGACACGGTCGATGTTTTAGCACTTTTCTTAGCTCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAGCAGATGGCTAATTTACCAAGTGATTCTAAAGGGGCTCAAGCGTTGAAAAGAGCTGAAAAAACTTACTTAGCAGCTCCTCTGCATGCAGAAATCATAGAGCGAAGATGGGGAGGGAGTAAGAATATGACAGTTGATGATGTGAAGGCAAGGATAAACAATTTGTTGAAAGAATATGTAGTTAGTGGTGACAAGAAAGAGGCTTTTAGGTGCATCAAGGACTTGAAAGTTCCCTTTTTTCACCATGAGATAGTGAAACGAGCTCTTATAATGGCGATGGAGAGGCGTCAAGAAGAAGGTCCTCTACTAGATTTGTTGAAGGAAGCAGCTGAAGAAGGTTTCATTAACGCTAGTCAAATGTCAAAAGGATTTGGTCGTTTGATTGACAACGTTGATGATTTATCACTTGACATACCGAATGCACGGGGGATTCTGCGGCAGTTAATGTCCAAGGCAGCATCTGAGGGTTGGTTGTGTGTTTCATCTTTGAAATCACTCTCATTGGAGCCTGAAAAAAGATCATTAGAAGATGGCGCTGCcagaaatttcaaagtaaaGGCTCAATCCATAATCAAAGAATACTTTTTGACTGGTGATATATTAGAGGTGAATAGTTGTCTAGAACAAGAGAACATCAATTGTTGTGCTGAACTGAATGCAATCTTCGTTAAGAGGTTGATTACGTTGGCAATGGATCGGAAGAATAGGGAGAAGGAAATGGCTTCTGTTTTGCTTTCCTCTTTGTGTTTCCCATCTGATGATGTTGTAAATGGTTTTGTAATGTTGATAGAGTCAGCAGATGACACTGCTCTGGATAATCCAGTAGTGGTTGAGGATCTTGCTATGTTTCTAGCAAGAGCAGTGGTAGATGAAGTCCTAGCACCACAGCATCTGGAAGAGATTGGAACACAGTGTTTGGGACCAGATTCAATTGGGAGCAAAGTGCTTCAAATGGCAAAGTCATTGCTAAAGGCTCGGCTCGCCGGGGAGAGAATCTTGAGGTGTTGGGGTGGTGGGGGAAGCAGCAGGCCTGGCTGGGCAGTAGAAGATGTCAAGGACAAAGTTGGAAAGCTGCTGGAGGAATATGAATCTGGAGGTGAGATTAGAGAAGCCTGTCGCTGTATTAAAGAGTTGGGAATGCCATTTTTCCATCATGAAGTTGTGAAGAAAGCTTTGGTGATAATTatggaaaagaagaatgataGGTTATGGGGTCTGCTCAAAGAGTGTTTTGAATCTGGATTAATAACTATATATCAGATGGCAAAGGGTTTTGGAAGGGTTGCAGAATCTCTTGATGACTTGGCTTTAGATGTTCCTGATGCTAAAAATCAGTTCACTCGCTACGTTGAACGTGCAAAAACTGAAGGATGGTTGgactcttcattttcttttggcaaaTCAGAACATGCAACAGAGAACGGCACCCGTTA 2036 0.4062 MDFRDGFVSNEHLELHRSASESADPSTVSPLQISPKSPKSPRVHGKLNKQSPKHGRQLCSPKDGRPKKGGSGGKGTWGGLLDTDDKNFLDPSDPNYDSSEECEHSNDTKTKDMESYKKKATVIVEEYFATDDTRQRKEMAAVLLSALYADTIDPSQIYKGFSKLVESADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKQMANLPSDSKGAQALKRAEKTYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERRQEEGPLLDLLKEAAEEGFINASQMSKGFGRLIDNVDDLSLDIPNARGILRQLMSKAASEGWLCVSSLKSLSLEPEKRSLEDGAARNFKVKAQSIIKEYFLTGDILEVNSCLEQENINCCAELNAIFVKRLITLAMDRKNREKEMASVLLSSLCFPSDDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMAKSLLKARLAGERILRCWGGGGSSRPGWAVEDVKDKVGKLLEEYESGGEIREACRCIKELGMPFFHHEVVKKALVIIMEKKNDRLWGLLKECFESGLITIYQMAKGFGRVAESLDDLALDVPDAKNQFTRYVERAKTEGWLDSSFSFGKSEHATENGTR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02342 678 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 134 - -
Bva03g02342 678 MobiDBLite consensus disorder prediction 20 36 - -
Bva03g02342 678 Gene3D - 235 367 - -
Bva03g02342 678 Gene3D - 535 666 - -
Bva03g02342 678 ProSiteProfiles MI domain profile. 551 670 IPR003891 -
Bva03g02342 678 MobiDBLite consensus disorder prediction 1 114 - -
Bva03g02342 678 MobiDBLite consensus disorder prediction 1 19 - -
Bva03g02342 678 ProSiteProfiles MI domain profile. 383 504 IPR003891 -
Bva03g02342 678 PANTHER PROGRAMMED CELL DEATH 4 135 671 IPR039778 GO:0045892
Bva03g02342 678 MobiDBLite consensus disorder prediction 86 114 - -
Bva03g02342 678 PANTHER PROGRAMMED CELL DEATH 4 1 134 IPR039778 GO:0045892
Bva03g02342 678 Pfam MA3 domain 553 661 IPR003891 -
Bva03g02342 678 Pfam MA3 domain 131 196 IPR003891 -
Bva03g02342 678 Pfam MA3 domain 385 494 IPR003891 -
Bva03g02342 678 Pfam MA3 domain 250 359 IPR003891 -
Bva03g02342 678 SUPERFAMILY ARM repeat 548 666 IPR016024 -
Bva03g02342 678 SMART ma3_7 249 360 IPR003891 -
Bva03g02342 678 SMART ma3_7 552 661 IPR003891 -
Bva03g02342 678 SMART ma3_7 116 196 IPR003891 -
Bva03g02342 678 SMART ma3_7 384 495 IPR003891 -
Bva03g02342 678 Gene3D - 129 225 - -
Bva03g02342 678 Gene3D - 372 527 - -
Bva03g02342 678 SUPERFAMILY ARM repeat 382 541 IPR016024 -
Bva03g02342 678 ProSiteProfiles MI domain profile. 248 369 IPR003891 -
Bva03g02342 678 ProSiteProfiles MI domain profile. 80 205 IPR003891 -
Bva03g02342 678 SUPERFAMILY ARM repeat 244 365 IPR016024 -
Bva03g02342 678 SUPERFAMILY ARM repeat 112 242 IPR016024 -
Bva03g02342 678 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 135 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02342 Bva-Chr3 20128442 20131311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02342 543 661 Eukaryotic Initiation Factors Gene Family AT5G57870 31.148 3.17e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02342 - - gmx:102668745 1063.14