Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02340 atgtcagGAGATGGAGATcggcagaagaagaagatcgCCGCTATCAGCATTTACTCGTTGCTACTGGTGGCTATGGCTGTCGCCGTCACCGTCGGCATAACAAACGACCTCCGCGAGCAGGAGGAGTACTCCGGCGCCggtgaagaagaagatcaCAACGACAGCAACAAGGCTCATGTCCCTTCCAGCTTAAAACAAGTGATATCACTTTGCGAATCCACGGATTACCAGGAAGAATGTGTTGACAGCATGAAAGAGGAGGCTGGTAATGTAACAAGCCCAAGAGAATTGATCAAGATTGCATTCAGCGTCACCATTGAAAAGATTCATGATGGATTGAAGGAATCTCAACTCTTGCGTGAAGTGGAGAAGGAACCAAGAGCCAAGATGGCATTGGATTCCTGCAAGGAACTATTGGAGAATTCCATTGATGATCTTAGGCACTCAATTGAGAGAGTCGGCGGCGAATTCGATGCCAAGAATTCCCATGAATTGCTCATGGATTTGAAGGTTTGGCTCAGCAGTACGATTACAAACCAAGAGACTTGCTTGGATGGATTCCAGAACACAACGAGCGAAGCTGctgagaaaatgaaggaagcATTGAAGCTGGCCATGCATTTGAGCAGCAACGGGCTTGACATAATTGACCATTCAGCAACTTCTCTCACCACCATCAACATCACACCAACAGCAAATGATCATGAAGAGGGAGCCACAGCAAATCATCAAGAGGGACACAGACGACTCCTTCAAGTGAATGATTTGGGTCGCGACCAGATTCTGTCGTGGATTGGTGGTGGTCTTCGTCGGAGACTCTTGTCTGAGGAAACCCTAGAGTTGGACAAGGGCAAGGCTGATGCTGTTGTTGCCAAAGATGGGAGTGGAAAGTTCAAGAGCATCAATGAGGCATTGAAGAATATGCCTATCAATAGCAATAAGCCATTCGTGATCTATGTTAAGGAAGGAATTTACAATGAGTATGTCaacattgagaaaaatatgacTCACGTTGTCATGGTCGGAGATGGTGGAGAAAAGACACGCATAACTGGCAACAAAAACTTCATTGATGGAGTTAACACATTCAAGACCGCCACCGTTGCTGTTGAGGGAGATAACTTCATGGCTATGAATATCGGGTTTGAGAATTCTGCTGGTCCTGAGAAACATCAAGCAGTGGCATTGAGGGTAGGAGCAGACATGGCTGTGTTCTATAATTGCTCAATGGATGGTTACCAAGACACACTATATATCCACACCAAGCGTCAATTCTATAGGGATTGTACTATTTCGGGCACAATTGACTTTGTGTTTGGTGACTCCCTTACGGTATTCCAGAATTGCACGTTCAAGGTTAGAAAGCCAATGGAAAATCAGCAATGCATTGTGACCGCCCAAGGCAGAAAGGATAAACATGAACCAACAGCCATTATCATCCAAGGCGGGTCAATCATGCCCGACCCATCATTCGACCCGGTTAAGTTGAAGAACAAAGTTTACTTGGCTCGTCCCTGGAAGCCTTATTCAAGGACCATCATCATGGATGCGTTTATCAGTGACTTGATCACACCTGAAGGATATCTACCATGGCAAAACAACCATACATGGATTGACACGTGTTTCTACACTGAGTACAACAACTCGGGTCCTGGTTCAAATAAGTCTGATAGGGTTAAATGGCCCGGTATCAAGGCTGTTACAGCAGAAGAAGCTCTTGATTTCACACCATCCAAGTTTTATAAAGGAGATGCCTGGATTAAGCATAGTGGAGTACCATACTCTCCTGAGACCATGCCCTCCAACTCCAAGTCTAACCCCGACTCTGTCTCTGACCCCAAGTCCAAGCCCGAGTCCGACTCTGGCTCCATATCTTTGCCCGATTCCAACCCGGACTTTGGCTCCATCCCCAAGTTAGACTCTCCTGACAAATCCAAATCTAAGCCCAACAAGTCCAAGCCGAAGTCCAAATCTGACACTGATAACCCCAAGTCAAAGCCCAAGTCCGAATTTGATTCTGACTCCAAGCCCAACTCTCATAGGAAGTCCAAACACCACTCCAATTCTGATCCCAAGTCTCACTCTAAGTCAGACTCAGACTCAAAGTCCAAGCCTAAATCTCATGGAAAGCCCAAATCCCACCACAAATCTAACTCTAAATCTCCTAAGCCCAAGCGAGACTCCAATTCCTCCTTCAAGCCCAAGTA 2207 0.4463 MSGDGDRQKKKIAAISIYSLLLVAMAVAVTVGITNDLREQEEYSGAGEEEDHNDSNKAHVPSSLKQVISLCESTDYQEECVDSMKEEAGNVTSPRELIKIAFSVTIEKIHDGLKESQLLREVEKEPRAKMALDSCKELLENSIDDLRHSIERVGGEFDAKNSHELLMDLKVWLSSTITNQETCLDGFQNTTSEAAEKMKEALKLAMHLSSNGLDIIDHSATSLTTINITPTANDHEEGATANHQEGHRRLLQVNDLGRDQILSWIGGGLRRRLLSEETLELDKGKADAVVAKDGSGKFKSINEALKNMPINSNKPFVIYVKEGIYNEYVNIEKNMTHVVMVGDGGEKTRITGNKNFIDGVNTFKTATVAVEGDNFMAMNIGFENSAGPEKHQAVALRVGADMAVFYNCSMDGYQDTLYIHTKRQFYRDCTISGTIDFVFGDSLTVFQNCTFKVRKPMENQQCIVTAQGRKDKHEPTAIIIQGGSIMPDPSFDPVKLKNKVYLARPWKPYSRTIIMDAFISDLITPEGYLPWQNNHTWIDTCFYTEYNNSGPGSNKSDRVKWPGIKAVTAEEALDFTPSKFYKGDAWIKHSGVPYSPETMPSNSKSNPDSVSDPKSKPESDSGSISLPDSNPDFGSIPKLDSPDKSKSKPNKSKPKSKSDTDNPKSKPKSEFDSDSKPNSHRKSKHHSNSDPKSHSKSDSDSKSKPKSHGKPKSHHKSNSKSPKPKRDSNSSFKPK 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02340 735 CDD PMEI-like_3 69 218 - -
Bva03g02340 735 SUPERFAMILY Pectin lyase-like 286 596 IPR011050 -
Bva03g02340 735 MobiDBLite consensus disorder prediction 41 60 - -
Bva03g02340 735 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 218 IPR035513 -
Bva03g02340 735 ProSitePatterns Pectinesterase signature 2. 431 440 IPR033131 -
Bva03g02340 735 SMART PMEI_2 62 215 IPR006501 GO:0004857
Bva03g02340 735 MobiDBLite consensus disorder prediction 639 679 - -
Bva03g02340 735 MobiDBLite consensus disorder prediction 595 630 - -
Bva03g02340 735 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 218 IPR006501 GO:0004857
Bva03g02340 735 MobiDBLite consensus disorder prediction 593 735 - -
Bva03g02340 735 Pfam Plant invertase/pectin methylesterase inhibitor 69 215 IPR006501 GO:0004857
Bva03g02340 735 Pfam Pectinesterase 287 584 IPR000070 GO:0030599|GO:0042545
Bva03g02340 735 ProSitePatterns Pectinesterase signature 1. 312 331 IPR018040 -
Bva03g02340 735 PANTHER PECTINESTERASE 15 601 - -
Bva03g02340 735 MobiDBLite consensus disorder prediction 707 721 - -
Bva03g02340 735 MobiDBLite consensus disorder prediction 690 706 - -
Bva03g02340 735 Gene3D - 282 598 IPR012334 -
Bva03g02340 735 PANTHER PECTINESTERASE 15 601 - -
Bva03g02340 735 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 217 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02340 Bva-Chr3 20120576 20123524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02340 4 656 Carbohydrate Esterase AT3G05610 42.878 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02340 K01051 - jre:109022340 662.144