Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02339 atgtcagGAGATGGAGATAGCAAGAAGGGTATCGCTGTTATCTGTGTTTCTTCCATTCTACTAGTGGGAGTGGTTATTGCCGTCACAGTTGGTGTGACATTTGATAACAATGACTCTAAGGATTCTAAGGACAGCAACCAGACTCATCTGGCTTCCTCAATGAAGGCTGTGAAATCAATCTGTCAACCCACAGATTACAAAAAAGAATGCGTTGACAGCCTGCAACATGAAGCTGGCAATGTAACAGACCCAAAAGAACTTGTCAAGATTGCATTCAACATCACCGTTAAGGAGATTTACGAAGGGATGCAGAAATCCCAACTGTTGCATGAATTGGAAAAGGAACCAAGAGCCAAGATGGCTCTTGATACCTGCAAGGAGCTCCTTGAGGATTCCATTGATGATCTCCGACGCTCGATTGATAAAATGGGCGAGTTTGACATCATGAACCTCTATGACTTGCTCATGGACTTGAAGGTTTGGCTCAGCAGCTCTATAACATACCAAGAGACATGCTTGGATGGATTCCAGAACACAACAAGCGAAGCTGGTGGGAAAATGAAGGATGCCTTGAAACTGGCAATGCGAATGAGCAGCAATGGTCTTGCCATCATCGACGATTTGGCATCAACCGTGGCCAAGTTAAACATGTCAACTGCAAGTGCAGGACAACGCAGGCTCCTTCAAGAGAATGCTGAGGGAGATTTGGATTTGGAAGACAATGTGTTGGGCCACGGCGAGATACCACTGTGGGTGGGTGGCGGTATTCGTCGGAGACTCTTGGAGGATAAAGTTCCGGGATTAGGAAAGCGCAAGGCTGATGTTGTTGTTGCTAAAGATGGGAGTGGAATGGTCAGTAGCATCAGTGAGGCATTGGCAAAGGTGCCCACCAAGATGAAGCAACCATTCATAATCTATGTTAAGGAAGGCATTTACAATGAATATGTTACGATTGGAAAAAAGATGACCGGTGTCGTCATGGTCGGTGAAGGTCCATATAAGACACGCATCACCGGAAACAAAAACTTCATTGATGGGGTTAACACCTTCAAGACCGCCACCGTTGCTGTTGAAGGGGATTACTTCATGGCAGTGAATATTGGGTTTGAGAACAGTGCTGGTGCTGAGAAACATCAGGCAGTAGCATTGAGAGTGGGATCGGACATGTCTGTCTTCTATAGATGTGCAATGGATGGCTACCAAGACACGCTTTATGCCCACACCAAGCGTCAATTCTATAGGGACTGCATTATTTCGGGCACAATTGACTTTGTGTTTGGTGACTCACTTTCAGTATTCCAGAATTGCACATTCAAGGTCAGAAAGCCAATGCAAAACCAGCACTGCATTGTGACAGCACAGGGCAGAAAAGATAGACATGAACCAACAGCCATTATCATCCAAGGCGGGTCAATTGTGGCCGACCCGGAATATGAACCTTATAAGTTGACCAACAAAGCCTTCTTGGCTCGTCCTTGGAAGCCTTATTCAAGGACCATCTTCATGGACACATACATTGGTGACTTGGTCACACCCGAAGGCTACATGCCATGGGCAATCGATGACACAGGGAACAAAACTTGCTTCTACTCTGAGTTTGAAACTCAGGGCCCCGGTTCAGACAAATCGCGTCGGGTTAAATGGCCCGGTGTCAAGACCATTACACCAGAGCATGCTCTTGATTTCACACCATTCAGGTTCTATAAGGGAGACGCTTGGATTAAGCGTACTGGAGTACCATACTCCGCTGGTGCCTATTCCGACTCCGGTACCAAGTCCGACAAGCCTAACTCCAACTCTGAATTGAACTCCGACCCGAAGTCGAAGTCCAGTCACTA 1838 0.4641 MSGDGDSKKGIAVICVSSILLVGVVIAVTVGVTFDNNDSKDSKDSNQTHLASSMKAVKSICQPTDYKKECVDSLQHEAGNVTDPKELVKIAFNITVKEIYEGMQKSQLLHELEKEPRAKMALDTCKELLEDSIDDLRRSIDKMGEFDIMNLYDLLMDLKVWLSSSITYQETCLDGFQNTTSEAGGKMKDALKLAMRMSSNGLAIIDDLASTVAKLNMSTASAGQRRLLQENAEGDLDLEDNVLGHGEIPLWVGGGIRRRLLEDKVPGLGKRKADVVVAKDGSGMVSSISEALAKVPTKMKQPFIIYVKEGIYNEYVTIGKKMTGVVMVGEGPYKTRITGNKNFIDGVNTFKTATVAVEGDYFMAVNIGFENSAGAEKHQAVALRVGSDMSVFYRCAMDGYQDTLYAHTKRQFYRDCIISGTIDFVFGDSLSVFQNCTFKVRKPMQNQHCIVTAQGRKDRHEPTAIIIQGGSIVADPEYEPYKLTNKAFLARPWKPYSRTIFMDTYIGDLVTPEGYMPWAIDDTGNKTCFYSEFETQGPGSDKSRRVKWPGVKTITPEHALDFTPFRFYKGDAWIKRTGVPYSAGAYSDSGTKSDKPNSNSELNSDPKSKSSH 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02339 612 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Bva03g02339 612 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 209 IPR035513 -
Bva03g02339 612 MobiDBLite consensus disorder prediction 582 612 - -
Bva03g02339 612 Gene3D - 269 585 IPR012334 -
Bva03g02339 612 SMART PMEI_2 52 204 IPR006501 GO:0004857
Bva03g02339 612 Pfam Pectinesterase 274 571 IPR000070 GO:0030599|GO:0042545
Bva03g02339 612 PANTHER PECTINESTERASE 13 588 - -
Bva03g02339 612 MobiDBLite consensus disorder prediction 584 612 - -
Bva03g02339 612 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Bva03g02339 612 CDD PMEI-like_3 59 210 - -
Bva03g02339 612 SUPERFAMILY Pectin lyase-like 272 584 IPR011050 -
Bva03g02339 612 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 208 IPR006501 GO:0004857
Bva03g02339 612 PANTHER PECTINESTERASE 13 588 - -
Bva03g02339 612 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02339 Bva-Chr3 20115246 20118201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02339 8 584 Carbohydrate Esterase AT3G05610 49.567 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02339 K01051 - gmx:100794799 687.182