Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02331 ATGGAAAATATTGTCCCCCATGCTAGACTTACCCCATCTTTGTTATTTTCACTTCTCTTCTTCTGGCTGACCGTGACAAAGACTTcagttttctctctctcagcAGATGGACAAGCCTTGCTTTCTCTTTTGCCTTCTGCAAAATCTTCCTCATCTGTTCTCTCCACTTGGAACCCTTCAAGTTCAACACCTTGTTCATGGCAAGGCATTACTTGCTCCCCACATGGTAGAGTCATTTCACTTTCTATCCCAGATACATTTCTTAACCTTTCCTCTCTGCCTTCACAGCTCTCTTCCCTGTCCTCTCTGCAACTTCTTAATCTCTCTTCTACTAATGTATCTGGCTCCATTCCAAGCTCTTTTGGCCAACTTTCCCAACTTCGCCTCCTTGACCTTTCCTCAAATTCCCTCTCGGGTTCCATTCCTGCAGAGCTTGGAAGGCTCTCTTCACTTCAGTTCCTTTTCTTGAACTCTAATAGATTGTCTGGGAAAATTCCTCCACAGCTTGCTAATCTTACTTCACTTCAAGTTCTCTGCCTCCAAGACAATCTCCTTAATGGGTCAATACCATCCCAATTAGGCTCTTTGATTTCTCTAGAACAGTTTCGGATTGGGGGTAATCCTTACTTGAGTGGAGAAATTCCATCACAGTTAGGACTACTGACCAATCTCACCACATTTGGTGCAGCAGCCACTGGACTTTCTGGTGTCATACCCTCTACATTTGGGAACATGATCAATCTCCAAACACTAGCCCTTTATGATACGGAAATTTCGGGTTCTATGCCACCAGAACTTGGATTGTGTTCTGAGTTAACGAATCTGTATTTGCATATGAATAAGCTGAGTGGTTCTATCCCACCTCAGCTGGGTAAGCTGCAAAAGCTTACTAGCTTGCTTCTTTGGGGAAATGCATTGTCAGGGCCAATCCCGGCTGATATTTCCAACAGTTCATCACTTGTTGTATTTGATGTCTCTGCTAATACTCTTTCGGGTGAAATACCGGCTGATTTTGGGAAGCTTGCGGTTCTAGAACAACTTCATTTATCAGACAATTCACTCACTGGTAAATTACCATGGCAGCTGAGCAACTGTACGAGCCTTGCAACTGTCCAGCTTGACAAGAACCAGTTTTCAGGTGCAATTCCATGGCAGATAGGCAAATTGAAGTTTCTGCAAAGCTTTTTCCTGTGGGGTAATTTGGTATCTGGAACCATACCTTCCTCTTTTGCCAACTGCACTGAGCTCTACTCACTTGACCTTTCAAGGAACAAGCTAACAGGTTCTATCCCGGAAGAAATTTTCAGTTTGAAGAAGCTAAGCAAACTTCTGCTGCTGGGAAATTCTTTATCAGGAAGGTTACCGCCAAGTGTTGCCAACTGCCAGTCTTTGGTAAGGTTGAGACTTGGAGAAAACCAACTTTCAGGAAGGATTCCTAAGGAGATAGGTCAATTGCAGAATCTAGTTTTTCTTGACTTATACATGAACCATTTCTCTGGAAGTTTACCTGTGGAGATTGCCAACATCACAATTCTTGAGCTTTTAGATGTGCATTATAACTACATTACTGGGGAAATCCCAACTGAGCTAGGGGAACTTGTGAATTTGGAGCAGCTTGATCTTAGTCGAAACAGTTTGACGGGTGAAATTCCATGGAGCTTTGGTAATTTCAGTTACTTGAACAAGCTCATCCTCAACAACAATTTACTGACAGGGTCAATCCCAAAATCCTTTAGAAACTTGCAGAAGTTAACTCTACTGGATTTGAGTTACAACAGCCTCTCTGGTGTGATCCCAGCCGAGATTGGTGATATTACAAGCTTAACCATCAGTTTGGACTTGAGCACAAATGCATTTACAGGAGAAATCCCAGAGTCAATGGCTGGTTTGACACAGTTACAATCACTTGATCTTTCCCATAATTTGCTTTTTGGAAGCATCGAGGTTCTTGGCTCCCTCACTAGTCTAACTTCCTTGAATATCTCATACAATGACTTGTCGGGTCCTATCCCGGTAACTCCATTCTTCAGAACTTTATCTTCAAATTCATACAATCAGAACCCTCATCTTTGTCAGTCCTTAGATGGCACTACATGTTCTTCAAGTCTGATTAGAAGAAATGGTCTGAAATCAGCCAAAACCATAGCTTTGATAGCGGTAATTCTTGCCTCACTTACCATGATTGTCATTGCATCCTGGATTCTAGTAACACGCAATCATAGATACATGATTGAAAAATCACTAGGTGCATCAGCTTCTACATCAGGAGTTGAGGATTTCTCTTATCCTTGGACTTTCATCCCATTTCAAAAGCTGAACTTCACCATAGATAACATCTTGGATTGCTTGAAAGATGAGAATGTGATTGGAAAAGGTTGCTCTGGTGTTGTTTATAAGGCTGAGATGCCTAATGGAGAATTGATAGCAGTGAAGAAGCTCTGGAAGGccaataaagaagaagaaacagtgGATTCTTTTACTGCAGAAATTCAGATTCTCGGTCACATCCGACATAGGAACATTGTGAGACTCCTAGGTTATTGTTCAAACAGGAGTGTCAAGCTTCTCCTCTACAACTACATTTCAAATGGTAATCTACGTCAGCTGTTGCAAGGGAACAGGAACCTAGACTGGGAAACTAGGTACAAGATTGCGGTTGGGTCAGCTCAGGGTCTTGCTTACCTTCACCATTATTGTGTGCCAGCAATTCTTCACAGAGATGTCAAGTGCAATAACATACTTCTAGATTCAAAGTTCGAGGCATATCTTGCAGATTTCGGTCTAGCAAAGTTGATGAGTTCACCAAACTATCACCATGCAATGTCCAGAGTTGCAGGTTCATATGGCTACATAGCCCCAGGCAAGTATATCTG 2873 0.4166 MENIVPHARLTPSLLFSLLFFWLTVTKTSVFSLSADGQALLSLLPSAKSSSSVLSTWNPSSSTPCSWQGITCSPHGRVISLSIPDTFLNLSSLPSQLSSLSSLQLLNLSSTNVSGSIPSSFGQLSQLRLLDLSSNSLSGSIPAELGRLSSLQFLFLNSNRLSGKIPPQLANLTSLQVLCLQDNLLNGSIPSQLGSLISLEQFRIGGNPYLSGEIPSQLGLLTNLTTFGAAATGLSGVIPSTFGNMINLQTLALYDTEISGSMPPELGLCSELTNLYLHMNKLSGSIPPQLGKLQKLTSLLLWGNALSGPIPADISNSSSLVVFDVSANTLSGEIPADFGKLAVLEQLHLSDNSLTGKLPWQLSNCTSLATVQLDKNQFSGAIPWQIGKLKFLQSFFLWGNLVSGTIPSSFANCTELYSLDLSRNKLTGSIPEEIFSLKKLSKLLLLGNSLSGRLPPSVANCQSLVRLRLGENQLSGRIPKEIGQLQNLVFLDLYMNHFSGSLPVEIANITILELLDVHYNYITGEIPTELGELVNLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNLLTGSIPKSFRNLQKLTLLDLSYNSLSGVIPAEIGDITSLTISLDLSTNAFTGEIPESMAGLTQLQSLDLSHNLLFGSIEVLGSLTSLTSLNISYNDLSGPIPVTPFFRTLSSNSYNQNPHLCQSLDGTTCSSSLIRRNGLKSAKTIALIAVILASLTMIVIASWILVTRNHRYMIEKSLGASASTSGVEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKANKEEETVDSFTAEIQILGHIRHRNIVRLLGYCSNRSVKLLLYNYISNGNLRQLLQGNRNLDWETRYKIAVGSAQGLAYLHHYCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMSSPNYHHAMSRVAGSYGYIAPGKYI 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02331 957 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Bva03g02331 957 PANTHER UNNAMED PRODUCT 15 953 - -
Bva03g02331 957 Pfam Leucine rich repeat 392 450 IPR001611 GO:0005515
Bva03g02331 957 Pfam Leucine rich repeat 559 618 IPR001611 GO:0005515
Bva03g02331 957 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Bva03g02331 957 SUPERFAMILY Protein kinase-like (PK-like) 768 953 IPR011009 -
Bva03g02331 957 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 285 382 IPR032675 -
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 383 479 IPR032675 -
Bva03g02331 957 SMART LRR_typ_2 172 196 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 124 148 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 630 653 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 413 437 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 341 365 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 485 508 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 293 317 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 581 605 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 100 123 IPR003591 -
Bva03g02331 957 SMART LRR_typ_2 533 556 IPR003591 -
Bva03g02331 957 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
Bva03g02331 957 Gene3D Phosphorylase Kinase; domain 1 753 860 - -
Bva03g02331 957 PRINTS Leucine-rich repeat signature 584 597 - -
Bva03g02331 957 PRINTS Leucine-rich repeat signature 630 643 - -
Bva03g02331 957 SUPERFAMILY L domain-like 44 402 - -
Bva03g02331 957 SMART serkin_6 783 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02331 957 Pfam Leucine Rich Repeat 535 557 IPR001611 GO:0005515
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 480 576 IPR032675 -
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Bva03g02331 957 Gene3D Transferase(Phosphotransferase) domain 1 861 955 - -
Bva03g02331 957 PANTHER - 15 953 - -
Bva03g02331 957 ProSiteProfiles Protein kinase domain profile. 783 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02331 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 903 915 IPR008271 GO:0004672|GO:0006468
Bva03g02331 957 SUPERFAMILY L domain-like 371 703 - -
Bva03g02331 957 Gene3D Ribonuclease Inhibitor 580 691 IPR032675 -
Bva03g02331 957 Pfam Protein kinase domain 785 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02331 Bva-Chr3 20087615 20090488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02331 31 953 Receptor kinase-like Gene Family AT5G56040 46.047 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva03g02331 Pkinase 4.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02331 - - gmx:100819611 1527.69