Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02327 atgaagaaagaaacagaagaaaatgaggcaGAAACCCCGACGGCGTCGGCACCTGCGACTCCGGAGACGCCAGCGCCGCTGTTCACGTCGCTTCGAGTGGACTCTCTTTCCTACGATCGGAACTCAATGCCACATCGCAAGTGCATGCCTTGGGGTTCGAGTGACCCCAACACGTGCTTCACTGATTTGCCAGTGCCTAAAGTCAATGTTTCTATTTCACGCAAGGTTGGAGCAGAGTTTGTGGGCACCTTCATACTGATGTTTGCAGCAACAGCAGGACCCATCATAAACCAGAAATACAATGGAGCAGAGACTCTAATCGGAAATGCATCGTGTGCAGGGCTAGCTGTGATGATCATAATCCTTTCAACTGGACACATCTCAGGAGCACACCTCAACCCATCCCTCACCTTAGCATTTGCTACGTTTCGCCATTTCCCTTGGGCCCATGTCCCGGCTTACATTGCTGCGCAGGTCACCGGCTCCATTTGTGCCTCTTTTGCTCTCAAAGGTGTCTTCCATCCCTTCATGTCCGGTGGTGTCACCGTCCCTTCTGGCAGCATTGCCCAAGCTTTTGCACTTGAGTTCATAATCACTTTCAATCTCCTCTTTGTTGTCACTGCTGTTGCTACTGACACTCGTGCGGTTGGAGAATTGGCAGGAATTGCTGTTGGAGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCTTTAAGTGGTGGTTCAATGAACCCGGTTCGCACCTTGGGTCCAGCAATTGCTGCGGGAAATTACAAGCATGTGTGGATATATTTGGTGGCACCTACGCTTGGAGCTCTTGCCGGTGCCGGTGTCTATACCATGGTCAAGCTCCGGGAAGACGAAGCCGATCCTCCTCGCCAGGTAAGGAGCTTCCGTCGCTA 902 0.5033 MKKETEENEAETPTASAPATPETPAPLFTSLRVDSLSYDRNSMPHRKCMPWGSSDPNTCFTDLPVPKVNVSISRKVGAEFVGTFILMFAATAGPIINQKYNGAETLIGNASCAGLAVMIIILSTGHISGAHLNPSLTLAFATFRHFPWAHVPAYIAAQVTGSICASFALKGVFHPFMSGGVTVPSGSIAQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPLSGGSMNPVRTLGPAIAAGNYKHVWIYLVAPTLGALAGAGVYTMVKLREDEADPPRQVRSFRR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02327 300 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Bva03g02327 300 PANTHER AQUAPORIN NIP5-1-RELATED 12 298 - -
Bva03g02327 300 PANTHER AQUAPORIN NIP2-1 12 298 IPR034294 -
Bva03g02327 300 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 MobiDBLite consensus disorder prediction 1 26 - -
Bva03g02327 300 CDD MIP 74 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 Pfam Major intrinsic protein 70 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g02327 300 Gene3D Glycerol uptake facilitator protein. 66 294 IPR023271 -
Bva03g02327 300 SUPERFAMILY Aquaporin-like 71 289 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02327 Bva-Chr3 20057104 20061394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02327 27 300 Major Intrinsic Protein MIP AT4G10380 76.786 1.43e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02327 K09874 - thj:104806473 461.455