Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02324 ATGGGCTCGAAAAGTCCCCAGACTGATCCACTTGATACATTGACGTATAAGAAATCTACTTCTCAAAAGGAACAGAACAAGTTCTTTAATTACATCAGTGAAGGAGAGAAAAAGCCATCTGACTTTCTACGTGCTGTATATGATGGTTGCATTGCTGGAGGTGCTGCAGGTGTTGTTGTAGAAACAGCTTTATACCCTATTGATACCATCAAAACTCGACTACAGGCTGCCCGTGGTGGAGGGAGGATCATTTTGAAGGGTCTGTATTCTGGATTAGCTGGGAATCTAGCTGGTGTCTTACCAGCTTCTGCAATTTTTGTTGGTGTATATGAACCAGTGAAGCAGACATTGCTAAAGTCCTTCCCTGATAATCTGAGTGCATTGGCCCATCTTACTGCAGGTGCTATTGGAGGTGCTGCTTCATCAATTATCCGAGTCCCAACCGAgGTTGTTAAGCAAAGGATGCAAACTGGGCAATTTAATTCAGCTCCTGATGCTATCCGTCTCATTGTCACCAAGGAGGGTTTTAAAGGTCTTTATGCGGGGTTTGGATCCTTTTTGCTACGAGATTTGCCGTTTGATGCGATACAATTTTGCATCTATGAGCAGCTCCGAATAGGATATAAACTAGCGGCCCAAAGAGATCTGAAGGATCCAGAGAATGCTATGCTTGGTGCTTTCGCTGGTGCTGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAAACCCGATTGATGGTTCAGGGATCACAACACCATTACAAAGGCATCTCTGATTGCATAAGGACCATAGTCAAAGAAGAAGGAGCCCATGCTCTTTTCAAGGGTATAGGGCCAAGAGTTTTGTGGATAGGCATTGGAGGTTCTATTTTCTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGGGACGCCCAAAAGCTGAGGATTA 938 0.4382 MGSKSPQTDPLDTLTYKKSTSQKEQNKFFNYISEGEKKPSDFLRAVYDGCIAGGAAGVVVETALYPIDTIKTRLQAARGGGRIILKGLYSGLAGNLAGVLPASAIFVGVYEPVKQTLLKSFPDNLSALAHLTAGAIGGAASSIIRVPTEVVKQRMQTGQFNSAPDAIRLIVTKEGFKGLYAGFGSFLLRDLPFDAIQFCIYEQLRIGYKLAAQRDLKDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQHHYKGISDCIRTIVKEEGAHALFKGIGPRVLWIGIGGSIFFGVLEKTKQILAQGRPKAED 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02324 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 44 116 IPR018108 -
Bva03g02324 312 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 4 310 - -
Bva03g02324 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 207 IPR018108 -
Bva03g02324 312 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 4 310 - -
Bva03g02324 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 302 IPR018108 -
Bva03g02324 312 SUPERFAMILY Mitochondrial carrier 50 297 IPR023395 -
Bva03g02324 312 Pfam Mitochondrial carrier protein 48 79 IPR018108 -
Bva03g02324 312 Pfam Mitochondrial carrier protein 220 305 IPR018108 -
Bva03g02324 312 Pfam Mitochondrial carrier protein 125 205 IPR018108 -
Bva03g02324 312 Gene3D Mitochondrial carrier domain 49 311 IPR023395 -
Bva03g02324 312 PRINTS Mitochondrial carrier protein signature 62 76 IPR002067 GO:0055085
Bva03g02324 312 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Bva03g02324 312 PRINTS Mitochondrial carrier protein signature 225 247 IPR002067 GO:0055085
Bva03g02324 312 PRINTS Mitochondrial carrier protein signature 49 62 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02324 Bva-Chr3 20042078 20047595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02324 131 312 Chloroplast and Mitochondria Gene Families AT2G30160 30.412 1.15e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02324 K15111 - qsu:112019314 476.478