Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02313 ATGGGCTGTGTTCAGACGAAGGCAGAAGATGGGTCAGTGCCTAAGGGATTGGaaaagttgaaacttgaaaatggGTATGTCGGCAATGCTGGTTTTGCTGCTCATCGACGATCCACGGGTCAGAGATATGAACGCAGGGAGTCTGGTAGGCAATCTCAGCTGGAAGCCAGAAAGAAGAAGGTTGAGTTTGCTAAAGGTAATGGAAATGATGGAGGGCAAGGTGATGGGCTTGACGGCTTTGGTGGTATAGCTGGAGGTGGAGACGAGGGAAGATTgaacaaaagagaaggaaagaggAGGGATCGTGTTCAAAAGGGTGGAAACTTGTCTAACAAATCTCTGGATGATGAAATGGTTGATGGATGGCCCAAATGGTTAGTTGATAATATTCCTAAAGAAGTCTTGGCTGGTTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAGGGAACATATAGCAATGTCTATAAAGCTCGAGATCGGGAAACTAGAGAAATTGTAGCCCTGAAGAAGGTTCGCTTTGATACATCAGAGCCTGAAAGCATCAAATTTATGGCAAgagaaattatgatattacAGAGATTGGATCATCCCAATGTAGTAAAGCTTAAAGGATTAGCTACATCAAGAATGCAGTACAGTTTGTATTTGGTTTTCGATTTCATGCAAACAGACTTGGCTCGAATTATTACTCGTCCTGAAGAGAGACTAACTGAACCACAgGTCAAGTCCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGGATTTTGCATCGAGACATTAAGGGGTCAAACCTTTTGATTGATAGAAATGGGATGCTTAAAATTGCAGATTTTGGGCTTGCCAATTTTTATAGTCCAGAAAGTAACCAGCCTCTGACAAGCCGGGTTGTGACACTATGGTACAGAGCTCCTGAGCTGTTGTTAGGTGCCACAGCTTATGGAGTTGGTATTGATCTATGGAGTGCTGGTTGCCTCCTCGCAGAAATGTTTACAGGGATTCCAATCATGCCTGGTAGAACTGAGGTTGAGCAACTTCATAGAATTTTCAGGCTGTGCGGCACACCCTCAGAAGAATACTGGAAAAAATTGAGACTTTCTACAACTTTTAGACCACCAAGGTCTTATAGACCTTCCCTTGTGGAAACTTTCAAGCCTCTCCCTCAATCTTGCTTAGGTCTTCTATGTAATCTGCTTGCTTTGGATCCTGCATACCGTGGTACAGCGTCTAAAGCTTTACAAAATGAATTTTTCTTTACAAGCCCATTAGCCTGTGACCTCTCGGGTCTGCCTGTAATCTACAGAGAAGATGATGAACAAGATCAAGCCAGTGAACAGATAAAGCGAATGAACGCTAAGATTAGACGATCTTGTACATTGCGTGAGCGTCGTAGGAAGAATCAAGCATCTGGGAGTCCAGTAGCGCCTGCTGCATCTCCTAAGGAAGAATTGAGAGTGGAAGAAGAGACTTGTTTCCCAAGCATTACTACAACTTCTAGCACCTCATCTAGTGTAAACCAAGCAGTGACAAAGGATGAGTCACTCTTGCTTCTTCCTTCACAAGTTCCTTCAAGTCAAAAGCAATCTCCCAAAATTCACTATCTTGCTAATGGTGGTGAGCATGCGAGGAACCTTCCTCCATTACTCAAATCAAAAGCAGCTGCGACAAAGAAAGATGAGAACAGATACAGATTAAAGCAGGTCCAAAGGTCTACATCCACTAGAGAATTTACAAACTTCAGAACAGGCGAAGCATTTTCTCCTTG 1796 0.4204 MGCVQTKAEDGSVPKGLEKLKLENGYVGNAGFAAHRRSTGQRYERRESGRQSQLEARKKKVEFAKGNGNDGGQGDGLDGFGGIAGGGDEGRLNKREGKRRDRVQKGGNLSNKSLDDEMVDGWPKWLVDNIPKEVLAGLVPKSAESYKMIDKVGQGTYSNVYKARDRETREIVALKKVRFDTSEPESIKFMAREIMILQRLDHPNVVKLKGLATSRMQYSLYLVFDFMQTDLARIITRPEERLTEPQVKSYMHQLLSGLQHCHDRGILHRDIKGSNLLIDRNGMLKIADFGLANFYSPESNQPLTSRVVTLWYRAPELLLGATAYGVGIDLWSAGCLLAEMFTGIPIMPGRTEVEQLHRIFRLCGTPSEEYWKKLRLSTTFRPPRSYRPSLVETFKPLPQSCLGLLCNLLALDPAYRGTASKALQNEFFFTSPLACDLSGLPVIYREDDEQDQASEQIKRMNAKIRRSCTLRERRRKNQASGSPVAPAASPKEELRVEEETCFPSITTTSSTSSSVNQAVTKDESLLLLPSQVPSSQKQSPKIHYLANGGEHARNLPPLLKSKAAATKKDENRYRLKQVQRSTSTREFTNFRTGEAFSP 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02313 598 Pfam Protein kinase domain 146 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02313 598 MobiDBLite consensus disorder prediction 38 65 - -
Bva03g02313 598 MobiDBLite consensus disorder prediction 575 598 - -
Bva03g02313 598 MobiDBLite consensus disorder prediction 89 106 - -
Bva03g02313 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bva03g02313 598 MobiDBLite consensus disorder prediction 32 112 - -
Bva03g02313 598 PANTHER CELL DIVISION PROTEIN KINASE 1 564 - -
Bva03g02313 598 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Bva03g02313 598 MobiDBLite consensus disorder prediction 577 598 - -
Bva03g02313 598 CDD STKc_CDK9_like 146 428 - -
Bva03g02313 598 Gene3D Phosphorylase Kinase; domain 1 136 228 - -
Bva03g02313 598 SUPERFAMILY Protein kinase-like (PK-like) 141 432 IPR011009 -
Bva03g02313 598 MobiDBLite consensus disorder prediction 471 496 - -
Bva03g02313 598 PANTHER CYCLIN-DEPENDENT KINASE 1 564 - -
Bva03g02313 598 ProSiteProfiles Protein kinase domain profile. 146 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02313 598 Gene3D Transferase(Phosphotransferase) domain 1 229 468 - -
Bva03g02313 598 SMART serkin_6 146 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02313 Bva-Chr3 19974466 19979451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02313 141 472 Core Cell Cycle Gene Families AT5G10270 44.286 8.57e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva03g02313 Pkinase 5.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02313 K08819 - gmx:100776854 739.954