Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02311 ATGGAAGCACTTTTCTTAAGCAAACCAGTTGCCCATTCCCACCTCAATCACTCGTCCAAACATCTCCTAACTTCTCAATTCCCTCTTCACCGCCAACAATCTCTTCGTCTCAAACCAACTCACAACACTCCCATTCTCACCGTCTGCGCCAtccaaaacccagaaaaacaAATCGACCAACCTCCCAAAGAATCCACCGCTCAGTTTAATCCCGAAGGTGAGTCCTACGGCGAAGTCAAAGGCATCATCGGAAGCAGAGCCCTCGAGGATGGAGTCTCCATGGAGTACCTCATCGAGTGGAAAGACGGGCATGCCCCTACCTGGGTCCCCTCCGATTTCATCGCCAAAGATGTAGTGGCGGAATACGAGACTCCGTGGTGGACCGCAGCCAAGAAAGCCGACCAATCGGCTCTCCAGCGCCTCGTTGAAGCAGAAGACGGCCGCGGTGTCGATGCTGTAGACAGCGACGGCCGAACCGCGCTTATTTTCGTCTCCGGACTCGGCTCGGAACAGTGCGTGCGGCTGCTCGCCGAAGCCGGAGCCAATCTGGACCACCGCGACAAGAGCGGCGGATTGACGGCGCTCCACATGGCGGCCGGATACGTGAAGCCAGACGTAGTGAAGCTGCTTTTGGAGCTGGGAGCGGATCCCGAGGCGGCGGATGACAGAGGGCGGACGCCACTGGAACTGGCGAGGGAGATTCTGCAGGTGACGCCGAAGGGAAATCCTATGCAGTTCGGGAGAAGGATTGGGTTGGAGAGCGTGATAAGATTACTGGAGGGGGAAATATTCGAGTACGCGGAGGTGCAGGAGCTGTTAGAGAAGAGGGGGAAGGGTGAACACGTGGAGTATTTGGTGAGGTGGAAAGATGGTGGGGCCAATGAGTGGGTAAAGCTAAGGTACATCGCAGAGGATCTACAGAGGGACTATGAGGCTGGATTGGAATATGCTGTGGCTGAGGCTGTGGTGGGGAAGAGAGTTGGAGATGATGGGAAATTAGAGTTATTGGTGAAGTGGGAAGATTTGGAAGAACCCACTTGGGAGCCTGAGGAAAATGTGGACCCTCAGTTAATCAAAGACTTTGAGCTTCAACAAGGAAATGGGCATGCTAGTCCTACTATTAAACTTGAGGATACCCTACAAGCAGAATTAACAGAGGATACCTA 1166 0.5317 MEALFLSKPVAHSHLNHSSKHLLTSQFPLHRQQSLRLKPTHNTPILTVCAIQNPEKQIDQPPKESTAQFNPEGESYGEVKGIIGSRALEDGVSMEYLIEWKDGHAPTWVPSDFIAKDVVAEYETPWWTAAKKADQSALQRLVEAEDGRGVDAVDSDGRTALIFVSGLGSEQCVRLLAEAGANLDHRDKSGGLTALHMAAGYVKPDVVKLLLELGADPEAADDRGRTPLELAREILQVTPKGNPMQFGRRIGLESVIRLLEGEIFEYAEVQELLEKRGKGEHVEYLVRWKDGGANEWVKLRYIAEDLQRDYEAGLEYAVAEAVVGKRVGDDGKLELLVKWEDLEEPTWEPEENVDPQLIKDFELQQGNGHASPTIKLEDTLQAELTEDT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02311 388 PANTHER HOMEOBOX PROTEIN WARIAI 1 367 - -
Bva03g02311 388 ProSiteProfiles Ankyrin repeat region circular profile. 190 222 - -
Bva03g02311 388 MobiDBLite consensus disorder prediction 55 75 - -
Bva03g02311 388 ProSiteProfiles Ankyrin repeat region circular profile. 156 188 - -
Bva03g02311 388 ProSiteProfiles Ankyrin repeat profile. 190 222 IPR002110 GO:0005515
Bva03g02311 388 SMART ANK_2a 156 185 IPR002110 GO:0005515
Bva03g02311 388 SMART ANK_2a 190 219 IPR002110 GO:0005515
Bva03g02311 388 CDD CD3_cpSRP43_like 314 363 - -
Bva03g02311 388 SUPERFAMILY Chromo domain-like 265 312 IPR016197 -
Bva03g02311 388 SUPERFAMILY Ankyrin repeat 122 233 IPR036770 -
Bva03g02311 388 SUPERFAMILY Chromo domain-like 73 126 IPR016197 -
Bva03g02311 388 SMART chromo_7 265 315 IPR000953 -
Bva03g02311 388 SMART chromo_7 316 366 IPR000953 -
Bva03g02311 388 SMART chromo_7 75 127 IPR000953 -
Bva03g02311 388 Pfam Ankyrin repeats (many copies) 176 231 IPR002110 GO:0005515
Bva03g02311 388 Gene3D - 263 312 - -
Bva03g02311 388 MobiDBLite consensus disorder prediction 364 388 - -
Bva03g02311 388 ProSiteProfiles Chromo and chromo shadow domain profile. 317 373 IPR000953 -
Bva03g02311 388 SUPERFAMILY Chromo domain-like 319 361 IPR016197 -
Bva03g02311 388 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Bva03g02311 388 Pfam Chromo (CHRromatin Organisation MOdifier) domain 319 362 IPR023780 -
Bva03g02311 388 Gene3D - 121 262 IPR036770 -
Bva03g02311 388 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 1 367 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Bva03g02311 388 MobiDBLite consensus disorder prediction 55 72 - -
Bva03g02311 388 Gene3D - 313 365 - -
Bva03g02311 388 Gene3D - 70 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02311 144 231 CAMTA Transcription Factor Family AT5G09410 36.170 1.99e-08 54.3