Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02307 ATGGATCGCGGCCTGCAAGCGGTCATCGCCGCAGCCGGAAGCTTCTTCGCCGTCACCCTCATCCTCGCCGTCATAATTCTCGCCTGCAAAGGAAGTAAGAAACCCCATCAACGCCGCACCGTCCAGTCCCGGGCAATCCAACAGAGGACCCGACCCGATCCACACCCGGATATGTCGTCCATCGTCGTCGATGCCAGCTGGTCCTCCGACCCGCACCTTCAGATTTCCATAACCGAGCTCGCCGCCGCAACCAACAACTTCTCGCCGAATCTGATCATCGGCGATGGCAGCTTCGGCCTGGTGTACAAGGCCCGCCTCTCGAACGGCCTGAGAGTGGCGATCAAGAAACTGTCGCCGGATGCTTTCCAAGGATTCCGGGAATTCCAAGCAGAAATGGAGACGCTGAGTAAGCTACGACACCAAAACATCGTCAAAATCCTGGGCTACTGGGCAGCGGGTCCGGAGAGGCTGTTGGTCTACGAGTTCATCGAGAGAGGCAGCCTCGACCAATGGCTACACGACGCGTCATCATCGTCAACCACCAACGACGACGAAGATGTGCGGCTACCGTTATCTTGGGAAACGAGGATCAAGATCATTCGATGCGTGGCAAATGGGCTTTGCTATTTGCACCAACTAGAAAAGCCTATTATTCATAGAGACATAAAGGCCAGCAATATCTTATTAAACTCACATTTTGAAGCTCACATTGCCGATTTTGGGCTTGCAAGGAGAATCGAGATGTCACATAGTCATGTTTCCACGCAATTTGCCGGCACGATGGGGTACATGCCGCCGGAGTACAGAGACGGGGTGAACGTGGCGAATGTGAAGGTGGACGTGTACAGCTTTGGAGTTCTGATGTTGGAAACGGGAACGGGGCAGCGGCCCAATTTGGCGTTGAAGTTGGACGACAGAGATGTTGGGCTAGTGGAATGGGCCAGTAAAAAGATGGGCCGAAACGAGCAAATGCAAATGGTTGATCCTACCATTTCCAGAGAAGGATTAAGGGAAGATAGTGTGAGAGAGTATTTTGAGATTGCCCGTTTGTGCACCAGCGAGCTGCAGAAAGACAGGCCAGACATGCCGGGAGTGGTGAAAATGTTGGATGCCTTGCCACCGGTTCGTTG 1130 0.5354 MDRGLQAVIAAAGSFFAVTLILAVIILACKGSKKPHQRRTVQSRAIQQRTRPDPHPDMSSIVVDASWSSDPHLQISITELAAATNNFSPNLIIGDGSFGLVYKARLSNGLRVAIKKLSPDAFQGFREFQAEMETLSKLRHQNIVKILGYWAAGPERLLVYEFIERGSLDQWLHDASSSSTTNDDEDVRLPLSWETRIKIIRCVANGLCYLHQLEKPIIHRDIKASNILLNSHFEAHIADFGLARRIEMSHSHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLETGTGQRPNLALKLDDRDVGLVEWASKKMGRNEQMQMVDPTISREGLREDSVREYFEIARLCTSELQKDRPDMPGVVKMLDALPPVR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02307 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bva03g02307 376 PANTHER OS01G0253100 PROTEIN 1 370 IPR045271 GO:0004714|GO:0006468
Bva03g02307 376 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Bva03g02307 376 SUPERFAMILY Protein kinase-like (PK-like) 68 369 IPR011009 -
Bva03g02307 376 MobiDBLite consensus disorder prediction 37 58 - -
Bva03g02307 376 CDD STKc_IRAK 93 372 - -
Bva03g02307 376 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Bva03g02307 376 Gene3D Phosphorylase Kinase; domain 1 55 162 - -
Bva03g02307 376 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 370 - -
Bva03g02307 376 SMART serkin_6 87 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02307 376 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Bva03g02307 376 Pfam Protein tyrosine and serine/threonine kinase 93 368 IPR001245 GO:0004672|GO:0006468
Bva03g02307 376 ProSiteProfiles Protein kinase domain profile. 87 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02307 Bva-Chr3 19947512 19949030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02307 5 369 Receptor kinase-like Gene Family AT5G07280 38.182 3.94e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva03g02307 PK_Tyr_Ser-Thr 3.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02307 - - lang:109335579 496.123