Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02302 ATGTGCTTGCTAACGGTGGCGCATCAACGGCGTTCAGGCGAGTTCGGCAGGTTTACGGCGCAGCACGGCACCACAAGCGGCGGTCATGAGGAAGATGCGCAAGGCCAAGAAGGCAGCTCAGGGCTAGCGCCGTCACCGGGACTCAACCAACCTTTGCAGCAAGGTGGGGTGGCGACAATGCCAGAACCTGTTTTTCCAGAGGATGGCAGAGCTCGAGAGTTGACAGCTATGGTTTCGGCGCTTACGCGTGTCGTGTCGGGCTCTGGCCAGAGAGACAACGAATGGGTCCAGCGAAGTGGTTTTCCTATGACGTCAACCTTTGGCCACCAAGTTTCTTCTCCTCGTTTGTCTGCTTATTCTCCCCATTCATCCTCTGTTTTGAGCTCTGCCTCTGGTTCTGGTTCTATGATCGGTCAGAAGAGAGGCCGTGAAGATGAAAGCGGTTCTTCTCAGCAGATAGATCCTGTTCCCAGAATCTACAGAGCCATTGGTGATTTCAGATTGCCTCAACAGGGAGAGTCTTCATCAGTAACGGAAGAAGCTAGCACTATTAGCACCGCCGCCGCTGCCACCGCCGCCACTACTCCTGTGACACCGTCGAGTGAAAGTGGTTCATATGAAGAAAGTGGtgagaggagaagaagataCAGAGGAGTGAGGCAGAGGCCTTGGGGAAAATGGGCAGCAGAAATTCGTGATCCTCATAAAGCAGCTAGAGTTTGGCTTGGTACATTTGACACAGCTGAGGCTGCAGCGAGAGCTTACGATGAAGCCGCATTGAGATTTAGAGGTAACAGAGCAAAACTAAATTTCCCAGAAAACGTTAAAATAGTACCAGCTGTTCAAAATCTTCCGGCAACCCGGTTGGCAATTTCGGATTCTCCGGTTACCCATTTGCATCCAATGCCAGCGCCGCAGTTGCCATTGCAGTCACCATTCATGCAGGCACAAGCTTTTCCAGGAAACTCTGATTTGATGAGAGACTACTGGGAATACTATCAATTGCTGCAGAGCTCCGATGACTTCCATGGccaacaacaacagcagcagcagcagcagcaacaacaacaacaaccacCTTCGAGTTTGCTAGAGCAGTGGTTCTATCAATCACAATTGGGTGCTCTTCAATCATCTTCAATGTTACCGTCATCACCatctttgtcttcttcttcgtCACTATCATCGTTTTCGCCTTCAACTCAAATATCCTCTGCTTCACTTCCTCTGTTTTCTAGTCAGCAAATGGGTATTTTCAGGCCACCGGGGAACCAGGGTCAGGGCACAGGTGGGTCAGATTTTCCGGCTTCAACTTGGTCAAATACCAGTGGCTATCCTCCACCATCTGGTTG 1352 0.4771 MCLLTVAHQRRSGEFGRFTAQHGTTSGGHEEDAQGQEGSSGLAPSPGLNQPLQQGGVATMPEPVFPEDGRARELTAMVSALTRVVSGSGQRDNEWVQRSGFPMTSTFGHQVSSPRLSAYSPHSSSVLSSASGSGSMIGQKRGREDESGSSQQIDPVPRIYRAIGDFRLPQQGESSSVTEEASTISTAAAATAATTPVTPSSESGSYEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVKIVPAVQNLPATRLAISDSPVTHLHPMPAPQLPLQSPFMQAQAFPGNSDLMRDYWEYYQLLQSSDDFHGQQQQQQQQQQQQQQPPSSLLEQWFYQSQLGALQSSSMLPSSPSLSSSSSLSSFSPSTQISSASLPLFSSQQMGIFRPPGNQGQGTGGSDFPASTWSNTSGYPPPSG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02302 450 MobiDBLite consensus disorder prediction 170 214 - -
Bva03g02302 450 Gene3D AP2/ERF domain 214 274 IPR036955 GO:0003700|GO:0006355
Bva03g02302 450 PANTHER DNA-BINDING DOMAIN 71 404 IPR044808 GO:0003700|GO:0009873
Bva03g02302 450 MobiDBLite consensus disorder prediction 341 361 - -
Bva03g02302 450 MobiDBLite consensus disorder prediction 106 136 - -
Bva03g02302 450 MobiDBLite consensus disorder prediction 170 205 - -
Bva03g02302 450 Pfam AP2 domain 215 264 IPR001471 GO:0003700|GO:0006355
Bva03g02302 450 SUPERFAMILY DNA-binding domain 215 273 IPR016177 GO:0003677
Bva03g02302 450 MobiDBLite consensus disorder prediction 414 450 - -
Bva03g02302 450 MobiDBLite consensus disorder prediction 106 156 - -
Bva03g02302 450 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 71 404 - -
Bva03g02302 450 PRINTS Ethylene responsive element binding protein signature 238 254 IPR001471 GO:0003700|GO:0006355
Bva03g02302 450 PRINTS Ethylene responsive element binding protein signature 216 227 IPR001471 GO:0003700|GO:0006355
Bva03g02302 450 MobiDBLite consensus disorder prediction 18 56 - -
Bva03g02302 450 ProSiteProfiles AP2/ERF domain profile. 215 272 IPR001471 GO:0003700|GO:0006355
Bva03g02302 450 SMART rav1_2 215 278 IPR001471 GO:0003700|GO:0006355
Bva03g02302 450 MobiDBLite consensus disorder prediction 14 65 - -
Bva03g02302 450 CDD AP2 223 274 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02302 Bva-Chr3 19919142 19921506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02302 207 279 AP2-EREBP Transcription Factor Family AT2G33710 75.342 1.06e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g02302 AP2 9.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02302 - - gmx:100804843 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01911 04 19438822 19440844 Bva03g02302 03 19919142 19921506 BWGD