Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02295 ATGGCACCTAGTGGTGCGCCATGGGTTccaatcatcttcatcatcataaacattattatgattaaCCATCTTGTTGTTCCTTCTTCTGCGGCTTCTGAGACTGAATTACTCCTCAAGTTCAAGGAATCGCTTCAAGACAACAATAAATTATCCTCTTGGAATGAATCATCTTCTCCATGTGGTGAAAAATCCCATTGGGTTGGTGTTCTCTGTTATAATGGAAAAATCTGGGGATTGAAACTTGAGAATATGGGGCTCAAAGGGACTGTTGATGTATATTCTCTTAAAGAGTTGTCAAATCTCAGAACATTAAGCTTCATGAATAACGATTTTGAAGGTTCTTGGCCAGAATTCCATGCCCTAATTGGTCTCAAGACCCTATACATTTCAAATAACAAGTTTAGTGGAGAGATTCCTGGGGAAACTTTCCAGGGAATGCAATGGTTGAAGAAACTTCATTTGTCCAACAATCAATTTACCTCTTCTATTCCAACTTCCCTCATCTTATTGCCCAGGCTTATGGAGTTGAGAATGGAGAATAACAAATTCACTGGCAATATACCCAAATTGAGTCAGAAAACTTTGAAAAGCTTTAATGTAGCTAACAATCGGTTGCATGGCCAAATTCCGGCCACACTAAGCCACATGCCTCCCTCATCCTTCGCTGGTAATGAAGGCCTGTGTGGAGCTCCATTGGAAGCATGCCCATCAAATAAACCTTCAACTATCAGCATTGTTGTGGTTGCTGTAGTTGTTGGTGTTGCAGTAATTGTGATAGTACTAGTGATCTTCATGCttaatagaagaaaacagCAATCATCAGCATCATTGGAGAATCCAGCATCAACCCCTCAAAGGAAATCTCATGCTAAGGATCTAGACGATGCTAGTGTACGGTCAGCATCAAGCGCCTCCACACATAGCAGAAGAGGAGACACCATGAAGTTAACATTTATTAAGGATGACCGAGAGAAGTTTGATCTGACAGAATTGCTAAGAGCCTCAGCTGAGATATTGGGCAGTGGTTGCTACAGTTCTTCCTACAAGGCTTCTATGGGGAATGGCCCAATGATGGTTGTCAAGAGATTTAAAGCAATGAACAACGTAGGAAGGGAAGAGTTTCAAGAACACATGAGAAGAATAGGAAGGTTGAAGCATCCTAATTTGCTTCCTCTTGTTGCCTACTATTATAGAAGAGAGGAGAAGCTCTTGGTTACAGATTTTGTTCAAAATGGCAGCTTGGCTGTTCGTCTTCATGCATATCAAGGGTTGGGGCAGCCAAGCCTTGATTGGCCAACCAGGTTGAAGATTGTTAAAGGGATAGCAAAGGGTCTTGAATTTCTCTACAGGGAGATGCCAAGCCTAATTGCACCCCATGGAAATCTCAAGTCCTCAAATGTTCTTCTCACTGAATCTTTTGAGCCTCTTCTTAATGATTATGGTTTAGCCCCAGTGGTAAACCAGGAGCTTGCTCATGACATCATGTCGATCTATAAATCCCCCGAGTatgtccaaaatggacgagtTACAAAGAAAACCGATGTTTGGACTCTCGGAGTACTAATCCTAGAGACTCTGACTGGAAAATTCCCAGCTAATTTCCTACACCAAGGTAAATCAAAGGAGGAGGATTTGCCCAAATGGGTTCTCTCAATTTCCCCAGAAGAGTGGCCAAACAAGGTGTTTGACAAAGAAATGGGATCAACCAGGAACAGTGACGGGGAAATGGTGAAGCTTTTGAAAATTGGGTTGGGTTGCTGTGAAGCAGATATGGACAAGAGGTGGGATTTGAAGGAAGCTGTTGAGAAAATTCAAGaggtgaaagagagagagaatgatgATGATTTCTATTCCACATATAGTGAAGCAGACATGAAATCTAGAAGGGGATTGTCAGatgaaatcaatttttg 1913 0.3983 MAPSGAPWVPIIFIIINIIMINHLVVPSSAASETELLLKFKESLQDNNKLSSWNESSSPCGEKSHWVGVLCYNGKIWGLKLENMGLKGTVDVYSLKELSNLRTLSFMNNDFEGSWPEFHALIGLKTLYISNNKFSGEIPGETFQGMQWLKKLHLSNNQFTSSIPTSLILLPRLMELRMENNKFTGNIPKLSQKTLKSFNVANNRLHGQIPATLSHMPPSSFAGNEGLCGAPLEACPSNKPSTISIVVVAVVVGVAVIVIVLVIFMLNRRKQQSSASLENPASTPQRKSHAKDLDDASVRSASSASTHSRRGDTMKLTFIKDDREKFDLTELLRASAEILGSGCYSSSYKASMGNGPMMVVKRFKAMNNVGREEFQEHMRRIGRLKHPNLLPLVAYYYRREEKLLVTDFVQNGSLAVRLHAYQGLGQPSLDWPTRLKIVKGIAKGLEFLYREMPSLIAPHGNLKSSNVLLTESFEPLLNDYGLAPVVNQELAHDIMSIYKSPEYVQNGRVTKKTDVWTLGVLILETLTGKFPANFLHQGKSKEEDLPKWVLSISPEEWPNKVFDKEMGSTRNSDGEMVKLLKIGLGCCEADMDKRWDLKEAVEKIQEVKERENDDDFYSTYSEADMKSRRGLSDEINF 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02295 637 SUPERFAMILY L domain-like 31 216 - -
Bva03g02295 637 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Bva03g02295 637 Pfam Protein kinase domain 336 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02295 637 Gene3D Phosphorylase Kinase; domain 1 297 408 - -
Bva03g02295 637 Gene3D Ribonuclease Inhibitor 193 235 IPR032675 -
Bva03g02295 637 PANTHER LRR RECEPTOR-LIKE KINASE 12 620 - -
Bva03g02295 637 Gene3D Transferase(Phosphotransferase) domain 1 409 627 - -
Bva03g02295 637 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Bva03g02295 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 620 - -
Bva03g02295 637 SUPERFAMILY Protein kinase-like (PK-like) 337 606 IPR011009 -
Bva03g02295 637 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Bva03g02295 637 MobiDBLite consensus disorder prediction 273 309 - -
Bva03g02295 637 ProSiteProfiles Protein kinase domain profile. 333 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02295 Bva-Chr3 19865062 19868477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02295 1 634 Receptor kinase-like Gene Family AT5G35390 51.429 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva03g02295 Pkinase 6.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02295 - - gmx:100804368 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02295 03 19865062 19868477 Bva03g02295 03 19865062 19868477 BWGD