Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02289 ATGGGTCACCTTGGCACAAGACCAATCTTGTTCTCTCTTGTTACTTTACCACTAATAATCCCAATTGCAAAGTTGCTCTCTTCCCATTTCTCCATAGCTTCCCCACcatcttttctctctattgCTGCCAATGCCATCATCATTTTCACTCTCATAACATACCTTTTCCCATCCATTTTCAAGAAGAATTCTGCTAATCTTCCACCAGGACCCGTCTCTGTCCCTATCTTTGGCAACTGGCTTCAAGTTGGCAATGACCTCAACCACCGTCTTCTTGCTTCCATGTCACAAACTTATGGCTCTGTGTTCCTTCTCAAACTTGGCTGCAAGAACTTAGTGGTGGTGTCTGATCCTAAGCTTGCCACTGAAGTTCTCCATTCGCAGGGCGTGGAGTTTGGTTCCCGTCCCCGGAACATTGTGTTTGATATTTTCACTGGGAATGGCCAAGACATGGTGTTCACAGTTTATGGTGAACATTGGCGCAAAATGAGAAGAATCATGACACTTCCATTTTTCACCAACAAAGTGGTTCAACACTACAGCAATATGTGGGAAGAAGAGATGGATTTGGTGGTGAGAGACCTTAAAACCAATCCAACAGTGAGAAGCCAAGGGATAGTTATCAGAAAGCGTCTGCAGTTGATGCTCTATAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCACAAGAGGATCCTCTATTCATTCAGGCAACCAAGTTTAACTCTGAGAGAAGCAGATTGGCTCAGAGttttgaatataattatgGAGATTTCATTCCCTTGCTTAGACCATTCTTGAGAGGATACCTCAATAAGTGCAGAGACTTGCAGAACAGGAGGCTAGCTTTTTTCAACAACTACTACATTCAACAAAGAAgGAAAATAATGGCTGCCAATGGAAAGCATCACAAAATAAGCTGCGCCATTGATCACATCATAGATGCTGAGATGAAGGGAGAAATTAGTGAAGAGAACGTTATCTACATCGTGGAGAACATCAACGTTGCAGCAATAGAAACAACACTATGGTCGATGGAGTGGGCAATAGCAGAGCTAGTGAACCATCCAAGTGTTCAGAGCAAGATTCGCCAAGAAATCTCCCAAGTCCTGAAAGGCCAACCAGTCACAGAATCCAACCTCCATGAACTCCCATACTTACAGGCCACTGTGAAAGAAACACTAAGGCTTCACACCCCAATTCCTCTTCTGGTGCCCCACATGAACCTTGAAGAAGCAAAGTTGGGAGAGTTTACCATTCCCAGAGAGTCCAAAGTGGTGGTGAATGCTTGGTGGTTGGCGAACAATCCGGCATGGTGGAAAAACTCAGAAGAGTTTAGGCCAGAGAGGTTCTTGGAAGAGGAATGTGGAACTGATGCTGTGGTTGGAGGGAAGGTTGATTTTAGGTTCTTGCCATTTGGGGTGGGGAGAAGGAGCTGCCCTGGGATTATACTTGCATTGCCAATTCTGGGGCTTGTTATTGCAAAGTTGGTGTCAGATTTTGAGATGAAATCTCCAAATGGGACAAATATTGATGTGAGTGAGAAAGGAGGACAGTTTAGCTTGCACATTGCCAACCACTCCACCGTCCTATTTGACCCTATCAACAAGCCATG 1622 0.4365 MGHLGTRPILFSLVTLPLIIPIAKLLSSHFSIASPPSFLSIAANAIIIFTLITYLFPSIFKKNSANLPPGPVSVPIFGNWLQVGNDLNHRLLASMSQTYGSVFLLKLGCKNLVVVSDPKLATEVLHSQGVEFGSRPRNIVFDIFTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVQHYSNMWEEEMDLVVRDLKTNPTVRSQGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATKFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQNRRLAFFNNYYIQQRRKIMAANGKHHKISCAIDHIIDAEMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPSVQSKIRQEISQVLKGQPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGEFTIPRESKVVVNAWWLANNPAWWKNSEEFRPERFLEEECGTDAVVGGKVDFRFLPFGVGRRSCPGIILALPILGLVIAKLVSDFEMKSPNGTNIDVSEKGGQFSLHIANHSTVLFDPINKP 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02289 540 Pfam Cytochrome P450 68 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 120 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Bva03g02289 540 Gene3D Cytochrome P450 59 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 9 538 - -
Bva03g02289 540 SUPERFAMILY Cytochrome P450 68 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva03g02289 540 PANTHER OS02G0467000 PROTEIN 9 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02289 Bva-Chr3 19829045 19830982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02289 45 538 Monolignol Biosynthesis Gene Families AT2G30490 63.380 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02289 K00487 - gmx:100812188 887.1