Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02274 ATGGCTGGTGCGATGAAGAAAGTCGACAAGATTCGACAAATCGTGCGGCTGAAGCAGTTCGTGATGCGGTGGAAGCACAATACTCTAAAGCAACGTTCTCTTCTCTCTTATTCCAATTCTGATTGCGCCGAATCCAAATCCAACGCGAATAGACGCGCACCGCCTGGTTTTCTAGCCGTTTACGTTGGCCTCGAACGCAAGCGATTTGTGATTCCGGCTCGATTTCTCAATCTTCCGATTTTCGTAGGTCTGCTCAAAAAAGCCGAGGAGGAGTTTGGATTTCAATGCGATGGAGGTTTGGTTCTGCCATGCGAGGTCGCTTTTTTCACATTAATGGTAAAATATcttgaaaaaaatgagaacaGATTTGGAAATTTCTCTCTGGAAGAGTTTGTGAAAATGGTTTCTGACGTGGGTTCCTATCCTTGCAAGGAAAACTCCATTGCTTTTACTCCTCTCTTGCAGAAAGCCAGAGTCTG 479 0.4405 MAGAMKKVDKIRQIVRLKQFVMRWKHNTLKQRSLLSYSNSDCAESKSNANRRAPPGFLAVYVGLERKRFVIPARFLNLPIFVGLLKKAEEEFGFQCDGGLVLPCEVAFFTLMVKYLEKNENRFGNFSLEEFVKMVSDVGSYPCKENSIAFTPLLQKARV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02274 159 Pfam Auxin responsive protein 16 114 IPR003676 GO:0009733
Bva03g02274 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 159 IPR003676 GO:0009733
Bva03g02274 159 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR71-LIKE 8 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02274 Bva-Chr3 19743110 19743930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02274 7 119 Calmodulin-binding Proteins AT3G43120 36.232 1.04e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02274 K14488 - nnu:104601597 189.119