Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02272 ATGAAGACAGTTACTTTCTATGGCAAGAAGTTGCAAAAACTTTGTAGCTCTTCGTGTAGAAACCTTGCTTGCTTTAccaaatcatttttcttgttgatttCTTCCTTGTATCGCTTCTTGCTCCGCAAATCAAACCCACTGTGGGTTCAAATTGGCTATTTCgtctctctttccttttttggtttttgggtTCTCAAGGTTCTTAAGCCTAGAACCGATTCATTTGCTCCTAGGAACTTGGATTTATTCTTCACCTCAGTCTCAGCCACCACCGTTTCAAGCATGTCCACAGTCGAAATGGAGGTGTTTTCTACCCCCCAACTAGTTGTTTTAACCATCTTAATGTTCATTGGTGGTGAAATCTTCTCCTCCATGCTAGGACTCCTTTTCATTAGGTTCAAGCACACAGCTCACCAAGACAGAATCGTTTCTGTTAATGGCAGTCCTCAGCATCCAAAGCCCACTGATACTATTGAACAAATTGAGTTACGTGTTGTGACAGGAGAATTTATTGCAGTCAACAATAAAACACAACATGAACTATCAGATGAATCAACACACTACACTTATCCATCTAATGGTTTATGTCATAACACATCATTAACTGCAGTGAACCTAGGTCCAAATTACTTATGGTGCTCATCAATCAAATACTTGGGTTTTGTCATCTTAGGTTACCTTTTAGCTGTCCATGTTGTAGGGGTAGGAATGGTGTCACTTTACCTTGCTGTAATTCCAAGTGCAGCTGAGGTTTTGAGAAACAAAGGGCTAAAACAGTCCACATTCTCTGTTGTCACCGTAGTTTCAACTTTTGCAAGCTGTGGTTTCGTTCCAACAAATGAAAACATGGTTGTTTTCAGCCAAAACTCAGGTCTCCTTCTAATGCTTATTCCTCAAGTGCTTCTAGGGAACACACTGTTCCCTCCTTGCTTGCGATTTTTCATCTGGGTGTGGGGGAAATTCTTCAAGAAACAAGAGTCAAggtttcttttgaaaaaaactgAGGATGTTGGGTACAAGCACTTGCTTCCGAGGTTGTCTTCAATCTTTCTGGTAGCTACTGTTTTTGGGTTTATAATGGTTCAATCCATATTGTTCTGCGCAACAGATTGGGATTCAGAAGCTCTTCAGGGACTGAATTCTTACCAGAAAATGGTTGGTGTTATCTTCCAAACTACGAATTCCAGACATACAGGGGAGACCATCATGGATTTGTCCATCGTATCTCCTGCAAGCTTGGTATTATTTGTGGTGATGATGTACCTTCCTCCTTACACGTCTTTCCTTCCAATTCCAGTAAAAGAAGACATGGAGAGCCAGGAAAGttgtaaaagaagaagaaaaacaaaagctttGGAGAACTTCATATTCTCTCAACTCTCCTATCTGACCATCTTCATCATCCTCGTATGCATAactgaaaggaaaaaactaAAGCAAGATCCCCTCAATTTCAACGTCTTCAGTATTGTTCTGGAAGTGATCAGTGCATATGGGAATGTAGGGTTTTCGATGGGTTACAGCTGCAAACGACAGTTGCATCCAGATGGGAACTGCCAAGACAAGTGGTTTGGATTTGCAGGGAAATGGAGTGATGAGGGCAAGATCATTCTCATATTGGTTATGTTGTTTGGAAGGCTTAAGAAATTCAACATGGATGGTGGCAAGGCTTGGAAGCTTCTTTA 1685 0.3869 MKTVTFYGKKLQKLCSSSCRNLACFTKSFFLLISSLYRFLLRKSNPLWVQIGYFVSLSFFGFWVLKVLKPRTDSFAPRNLDLFFTSVSATTVSSMSTVEMEVFSTPQLVVLTILMFIGGEIFSSMLGLLFIRFKHTAHQDRIVSVNGSPQHPKPTDTIEQIELRVVTGEFIAVNNKTQHELSDESTHYTYPSNGLCHNTSLTAVNLGPNYLWCSSIKYLGFVILGYLLAVHVVGVGMVSLYLAVIPSAAEVLRNKGLKQSTFSVVTVVSTFASCGFVPTNENMVVFSQNSGLLLMLIPQVLLGNTLFPPCLRFFIWVWGKFFKKQESRFLLKKTEDVGYKHLLPRLSSIFLVATVFGFIMVQSILFCATDWDSEALQGLNSYQKMVGVIFQTTNSRHTGETIMDLSIVSPASLVLFVVMMYLPPYTSFLPIPVKEDMESQESCKRRRKTKALENFIFSQLSYLTIFIILVCITERKKLKQDPLNFNVFSIVLEVISAYGNVGFSMGYSCKRQLHPDGNCQDKWFGFAGKWSDEGKIILILVMLFGRLKKFNMDGGKAWKLL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02272 561 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 18 560 - -
Bva03g02272 561 Pfam Cation transport protein 216 513 IPR003445 GO:0006812|GO:0008324|GO:0055085
Bva03g02272 561 PANTHER SODIUM TRANSPORTER HKT1 18 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02272 Bva-Chr3 19723361 19726987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02272 66 560 Inorganic Solute Cotransporters AT4G10310 46.693 2.16e-145 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02272 K24976 - vvi:100242150 627.091