Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02269 ATGCGCCAAATCCACACCCACGAGATTACCACTATGTCTTCTCTTTTAGATGATTGCCGGGAGCATCTGCTGGATATAGATTGCAAGATTAATGGCACAGATGATAAGACCCAGAACAAATTTCGTATAGAAAATCTCACTAAGTTAGCCGACGCAGGGAATCCCATTCTCAGGGGCATCACCGTCGACATTCCAAAGGGCATGATCGTTGGAATCATAGGGCCCAGTGGCAGCGGAAAATCGACGCTCTTAAGGGCCTTGAACCGCCTCTGGGAGCCACCGTCCGCCACCGTGTTTTTGGACGGTCATGATATCACCGACCTGGATGTCCTCTCTCTTCGCCGCAAGGTCGGGATGTTGTTCCAACTCCCTGCCCTCTTTGAAGGCACAGTTGCGGACAATATACGGTATGGACCACaattaagaggaaaaaagCTAACAGACGATGAAGTCTGCAAGTTACTGATACTTGCGGACCTAGATGCTTCTTTCCTGAACAAGACAGGTACTGAACTCTCTGTGGGTCAAGCTCAAAGAGTTGCCCTTGCCAGGACCTTAGCTAATTCACCAGAGGTTTTGCTTCTGGATGAGCCAACAAGTGCCTTAGATCCAATATCAACAGAGAACATAGAGGATGTTTTGGTGAAGCTGAAGCACAATCAGGGTATGACAGTCATAATGGTTTCTCACAGCATTAAGCAAATTCAGAGGATAGCTGACATAGTGTGCTTGCTTGTTGATGGCCAAATTGTTGAAGTTTTGAAGCCTAATCAACTCTCTCAAGCAAACCATCCAATGGCACAAAAGTTTCTTCAACTCAGTTCTTG 827 0.4607 MRQIHTHEITTMSSLLDDCREHLLDIDCKINGTDDKTQNKFRIENLTKLADAGNPILRGITVDIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSATVFLDGHDITDLDVLSLRRKVGMLFQLPALFEGTVADNIRYGPQLRGKKLTDDEVCKLLILADLDASFLNKTGTELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDVLVKLKHNQGMTVIMVSHSIKQIQRIADIVCLLVDGQIVEVLKPNQLSQANHPMAQKFLQLSS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02269 275 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 19 275 - -
Bva03g02269 275 Pfam ABC transporter 57 200 IPR003439 GO:0005524
Bva03g02269 275 ProSitePatterns ABC transporters family signature. 172 186 IPR017871 GO:0005524
Bva03g02269 275 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 19 275 IPR005670 GO:0005315|GO:0016020|GO:0035435
Bva03g02269 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 262 IPR027417 -
Bva03g02269 275 CDD ABC_PstB_phosphate_transporter 41 259 IPR005670 GO:0005315|GO:0016020|GO:0035435
Bva03g02269 275 Gene3D - 37 274 IPR027417 -
Bva03g02269 275 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 272 IPR003439 GO:0005524
Bva03g02269 275 SMART AAA_5 66 256 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02269 Bva-Chr3 19711614 19713503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02269 56 273 Calmodulin-binding Proteins AT2G36910 31.416 1.44e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02269 K02068 - jre:108992093 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02269 03 19711614 19713503 Bva03g02269 03 19711614 19713503 ECH