Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02260 ATGGCGAAGAGGTACTGCTACAGAGATGTGCTGCCTTTCGGGGCCATGGTGACCATGGAATGCATCAACGTGGGGCTGAATACTCTGTTCAAAGCAGCCACCATGAGAGGGATGAGCTACCATGTCTTCGTTGTCTATGCTTATGCTGTTGCTGCTATTGTACTCCTCCCTATGTCCTTAATCTCCCAAAGATCAAGAGTACTTCCTCCACTGAATTTCTCCATACTATCCAAAATTGGTCTTCTTGGACTGATAGGATGCTCATCTCAGATCATGGGGTATACAGGGATCAGTTTCAGTTCTCCTACACTTTCCTCCGCCATTAGCAATTTGGTGCCAGCGTTCACCTTCTTGTTTGCCATCATGTTCAGGATGGAAAAGGTAGCCTTTAAAAGCAGAACTTGTCAAGCTAAGGTGTTGGGCACCATAGTATCAATAGCAGGTGCATTTGTAGTGACACTGTACAAAGGCCCACCAATCATCACCGTCCATTCACCGTCCCTTTCACTTCATGAACCTCTTAAGGTTATTAATTCAGTGGATCGAAGTTGGGCCCTTGGTGGCCTTCTGCTCACAGCTGAGTATATACTTGTTCCACTTTGGTACATTGTACAGGTGCAAATCATGAAGGTGTACCCAGATGAAGTAACTGTTGTCTTCTTTTACAACTTATCTGTGAGCATAATGTCTGCAGTTGTAGGTTTATTTACAGAGCCAAATGCAAGTGCTTGGAAAATAAGACCTGATACAGCATTGGCCTCCATTCTTTGCTCTGGAATTTTTGGGTCATTCTTGAACAACACAGTTCATACCTGGGCTCTGCGCATTAAGGGTGCAGTCTATGTAGCAATGTTCAAGCCACTCTCAATTGCCATTGCTGTTGCCATGGGGGTTATGTTCTTAGGCGATACTCTCTATCTTGGAAGTCTGATAGGAGCAACCATAATATCAATTGGGTTTTATACTGTTATGTGGGGCAAAGCATCAGAAGAGATGGAAGAAGAAGTTGGTGTTGGTAACCTGCAGGAATCACCAACTGCAGAGAATGTTCCTCTCTTGCAAAgctataaaaatgaaagagctgaaaagaaaatgcatggAAATGTATA 1109 0.4265 MAKRYCYRDVLPFGAMVTMECINVGLNTLFKAATMRGMSYHVFVVYAYAVAAIVLLPMSLISQRSRVLPPLNFSILSKIGLLGLIGCSSQIMGYTGISFSSPTLSSAISNLVPAFTFLFAIMFRMEKVAFKSRTCQAKVLGTIVSIAGAFVVTLYKGPPIITVHSPSLSLHEPLKVINSVDRSWALGGLLLTAEYILVPLWYIVQVQIMKVYPDEVTVVFFYNLSVSIMSAVVGLFTEPNASAWKIRPDTALASILCSGIFGSFLNNTVHTWALRIKGAVYVAMFKPLSIAIAVAMGVMFLGDTLYLGSLIGATIISIGFYTVMWGKASEEMEEEVGVGNLQESPTAENVPLLQSYKNERAEKKMHGNV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02260 369 PANTHER WAT1-RELATED PROTEIN 9 348 IPR030184 GO:0016021|GO:0022857
Bva03g02260 369 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Bva03g02260 369 Pfam EamA-like transporter family 202 324 IPR000620 GO:0016020|GO:0016021
Bva03g02260 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 328 - -
Bva03g02260 369 PANTHER WAT1-RELATED PROTEIN 9 348 - -
Bva03g02260 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02260 Bva-Chr3 19666519 19669426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02260 1 360 Nodulin-like Gene Family AT3G28050 61.351 4.10e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02260 - - gmx:100814137 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02260 03 19666519 19669426 Bva03g02260 03 19666519 19669426 ECH
Bva03g02260 03 19666519 19669426 Bva04g00183 04 1118297 1122694 ECH