Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02256 ATGTCACAAGGCTATGCTATTGAGCTTTACTTGGATCCTGCCCTTGAAAATCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGGCAAATCAGTACCCAACTCATCGAAATTGAGTCGCGGCCTCACATCTCCCTATTCTCCAGCCCACTCGTTGATCCCGCTAAGCTTGAAACTATTGTCAAGAACTTCGCTTCGAAGCAGGAACCTTTaccactttctttctcttcaattgGGAGTCTTCCAAATGACAACAATGTGCTCTTTCTTGCACCGACACCCTCAATTTCTCTACTTCAGTTCCAATCCCAATTGTGTGAtgcaatgaagaaagaaggcATTGAGATAGGAGAGGAGTATCGTCCAGATAATTGGATTCCTTATTGCTCGGTTGCTCAGGATGTGCCAAAAGCTAGGATGGCTGAGGCGTTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTGCTGGGTACGCTGTGGATATTGGGTTGGTAGAATTCTCACCTGTTCGTGAGCTCTTCTCCTTTGGGCTTGGCAATACAGTAGAATG 548 0.438 MSQGYAIELYLDPALENQVLKAWNVLARRQISTQLIEIESRPHISLFSSPLVDPAKLETIVKNFASKQEPLPLSFSSIGSLPNDNNVLFLAPTPSISLLQFQSQLCDAMKKEGIEIGEEYRPDNWIPYCSVAQDVPKARMAEAFCVLRDLKLPVAGYAVDIGLVEFSPVRELFSFGLGNTVE 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02256 182 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Bva03g02256 182 Gene3D Cyclic phosphodiesterase 4 178 - -
Bva03g02256 182 PANTHER - 1 181 - -
Bva03g02256 182 SUPERFAMILY LigT-like 4 150 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02256 Bva-Chr3 19643757 19644929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02256 1 182 Calmodulin-binding Proteins AT5G40190 73.077 8.97e-95 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02256 - - zju:107415389 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02256 03 19643757 19644929 Bva03g02256 03 19643757 19644929 ECH