Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02250 ATGGCGTCGAGCTCGGCTTGGACAGCAAAGCAGAACAAAATGTTTGAGAATGCTTTGGCGACGTATGACAAGGACAGCCCAGATAGGTGGCAGAAGCTGGCCAGAGCAGTCGGAGGGAAGACGGTGGAGGAGGTGAAGAGGCATTATGACAAGCTTGTGGAAGATGTGAAGCAGATTGAGGAAGGCCAAGTGCCTCTCCCCAATTACAGAAAGATTAATGCTTCAGGGACCTCCAAAGCTGCTTACAGTTACATGGAAGAAGAACACAGGATGAAGAATCTTAGCCTGCAGTA 293 0.4949 MASSSAWTAKQNKMFENALATYDKDSPDRWQKLARAVGGKTVEEVKRHYDKLVEDVKQIEEGQVPLPNYRKINASGTSKAAYSYMEEEHRMKNLSLQ 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02250 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 97 - -
Bva03g02250 97 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
Bva03g02250 97 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Bva03g02250 97 SMART sant 3 55 IPR001005 -
Bva03g02250 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 97 IPR044636 GO:0003700
Bva03g02250 97 CDD SANT 6 53 IPR001005 -
Bva03g02250 97 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Bva03g02250 97 Coils Coil 42 62 - -
Bva03g02250 97 Gene3D - 1 66 - -
Bva03g02250 97 Coils Coil 84 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02250 Bva-Chr3 19610048 19610627 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva03g02250 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02250 - - gmx:100804049 147.902