Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02236 ATGGATTTAAGATTTGGGCTTACAAACTCGGCCCAAATTTCTACCGCCGGCGCCTTATCCTGTGGCTTTGACCTAGGTGCGGACTcgatcaaaattttgaaacagcTTCGGAATTCGCTTCGGAAAGCCGTAGGATTTGTTAATTCGACGATCCATTTCACAGTTTTCCTCCATCGATTCCTATTTGGTCCATTGCGACCCTgcggagagagaaagagagacgCGCAAAAGGGGAGAGCTAGCTTAGGGTTTACGGTTTTGGAGTGTGGATTGTTCACCATGGACAGTGAAATCTTGCTTGATTCAGAGCACCGCGGTGGTGGAGGCTACAATACAAGGAGGGGAAAAATGGTGTGGGGAGAATCTGTGGGAGGTGCCCCGCCGCAGAAAATACTGGCTGATATAACCAATTTGCAGCAGCAGTGCCCAAAACCTTCCGGCCAACCCTCAAAGCTAAGGTCTGTTTCACTTGCAACTGACAACATCACTGACCAGCTACAGAAGGAAAATGCAACACTGGTGAAGCTTCTAGCCAACAGAAATGCAATTATAGAATCGAATGGAGCTGAGTTACTGAAATTGCAGAGCAATTTCCAGAAACTGCAGAAGCAAAACTTGCAACTTGCCAAAGCAAATAGCCAGATGCTGGGGGAGCTAAATTCAAGTCGTCAGAGGCTAAGAGAACTTCAGCATGAATTGGGATGCAAAAATGGTATGCTCAAAGCCAGTGAAAGAGAATACATGGAAAAACAGGACAGAGCGAAAGTGACATGTGAAATTGCTCCAAATGAGGTAGGAAGTTCTCAGAGTGAGCAGTCAGGTGAAACTTTTCAAGTTGATAGCAAGGAAAATTGTCGTGGCCATGGGAAAAGGAGGAGAGCGTCCAAATCTCAATCTTCTGTTTCTGCGGCTGCTGAGCAAGTAAATTCTATCGAGAAGTTTGACAACCAGAGGTATTGTTTGAGAAGGCAATCAAGAGGGTTCAACGCAGAAAAACCAGGACCAACAGAAGACGTGTTTGAAGTACATGATAATGAATCTTCTGTCACTCATCACAAAGAAAATCTGGTAACCGAAACCAGACCAGCCTCATCAAGACTAACAGTGCCTGAAGCAACCACAGAGCATATTCAATCTTTGGGAGCTACTAACATTGATGAAGTTCATGCTAAGGAGAAAGTCGACAGCAAGAGGCGTAGTTTGAGAAGGCAGTCTACCAGGTTTGAGGCTGAAAACTCTGAGCCAACTGAAGACTTGTTTGCGATAGATGATGCAAGCTTTCCTGTTTTAGTTATGTGTGATGATCAAGTAGTGAAGAGTTGTACAACAACATTAAGTGCCACTTTTGGACAAGATAATAAAGGAACAGATAGTGCCATTAACTGTGAGGCTCAGGAAATTCGAAGATCATCAATTGGGAGGCCATTGCGTCAAGCGGCTGTGAAGGTTCAGTCCTACAAGGAAATTCCTCTTAATTTGAAGATGCGCAGACCTGAGTG 1499 0.435 MDLRFGLTNSAQISTAGALSCGFDLGADSIKILKQLRNSLRKAVGFVNSTIHFTVFLHRFLFGPLRPCGERKRDAQKGRASLGFTVLECGLFTMDSEILLDSEHRGGGGYNTRRGKMVWGESVGGAPPQKILADITNLQQQCPKPSGQPSKLRSVSLATDNITDQLQKENATLVKLLANRNAIIESNGAELLKLQSNFQKLQKQNLQLAKANSQMLGELNSSRQRLRELQHELGCKNGMLKASEREYMEKQDRAKVTCEIAPNEVGSSQSEQSGETFQVDSKENCRGHGKRRRASKSQSSVSAAAEQVNSIEKFDNQRYCLRRQSRGFNAEKPGPTEDVFEVHDNESSVTHHKENLVTETRPASSRLTVPEATTEHIQSLGATNIDEVHAKEKVDSKRRSLRRQSTRFEAENSEPTEDLFAIDDASFPVLVMCDDQVVKSCTTTLSATFGQDNKGTDSAINCEAQEIRRSSIGRPLRQAAVKVQSYKEIPLNLKMRRPE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02236 499 MobiDBLite consensus disorder prediction 262 280 - -
Bva03g02236 499 Coils Coil 191 232 - -
Bva03g02236 499 MobiDBLite consensus disorder prediction 262 304 - -
Bva03g02236 499 Pfam Shugoshin C terminus 473 497 IPR011515 GO:0000775|GO:0005634|GO:0045132
Bva03g02236 499 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bva03g02236 499 PANTHER SHUGOSHIN 2 124 498 IPR044693 GO:0000775|GO:0034090|GO:0045144
Bva03g02236 499 PANTHER SHUGOSHIN 2 124 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02236 Bva-Chr3 19510047 19512966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02236 03 19510047 19512966 Bva09g00247 09 1250410 1251170 ECH
Bva04g02580 04 23072888 23073647 Bva03g02236 03 19510047 19512966 ECH
Bva13g01953 13 15740400 15741289 Bva03g02236 03 19510047 19512966 ECH
Bva03g02236 03 19510047 19512966 Bva03g02236 03 19510047 19512966 ECH