Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02234 atgttTTCAAGGCTAATACATCCGCACGAAGGGGCTGTTGGGGAGGAAGATGTGCTGGGTGCTTCAAACCACAGTCATTTGGGAGACCCATGTCTTGTATTGACTGCTGATCCAAAACCTCGCCTTCGTTGGACTGCTGACCTTCATGAACGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCGGTAAAGCAACACCAAAAGCCCTCATGCGGACCATGAATGTCAAGGGTTTGACTCTTTATCATTTGAAGAGCCATCTGCagAAATACAGACTTGGTAAGCAATCTGGGAAAGAACTGGGTGAGGGATTCAAAGATGGAATTGCAGCTTCATATCATTTGGAGAGCCCTGGTACTGATAACTCTTCTCCAAAGTTGCCAACTTCTGATGCAAACGAGGGTCACGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTTCACTTGCTAGTGGAgGCTGAGAAGCACTTGCAGATTCGCCAGGAGGCAGAGCGGAGGTATATGGCCATTCTTGAGAGAGCTTGTATAATGTTGGCTGATCAGTTTATTGGTGGAAACGAAACAGTCACAGACGCAGACAGAGACACAGGCAGCCAAAAATTTCAAGGACTGGAAAATAAAGCACCGAGAAGCTCCTTCCTTGACCCACTTGGTTTTTACACTTTACCCTCTGCTGAGGCTGCTGCAGTGCAGGCCCCAGAAGAAGTGGCAGCCAGTATGCAGCCCCAAAGGGCTGACTGTTCTACTGAAAGTTGCCTAACATCTCTAGAGGGTTCACAAGGTGGGGATGGGGTAACAAAGAGGATGCTGAGCTTGGATTCAGTGGTAGCACCTTTGATTTGGAGTGAAGTCAACATGAGAACTCAAGGTGTCCAAGCCCAAGTTAATCCTCATGGATTAACTAGGTATGGCGTTAACAATTGGAAGCTTGCTTG 950 0.4716 MFSRLIHPHEGAVGEEDVLGASNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGAGKATPKALMRTMNVKGLTLYHLKSHLQKYRLGKQSGKELGEGFKDASYHLESPGTDNSSPKLPTSDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQEAERRYMAILERACIMLADQFIGGNETVTDADRDTGSQKFQGLENKAPRSSFLDPLGFYTLPSAEAAAVQAPEEVAASMQPQRADCSTESCLTSLEGSQGGDGVTKRMLSLDSVVAPLIWSEVNMRTQGVQAQVNPHGLTRYGVNNWKLA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02234 313 MobiDBLite consensus disorder prediction 113 127 - -
Bva03g02234 313 MobiDBLite consensus disorder prediction 108 130 - -
Bva03g02234 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 306 IPR044848 GO:0003700
Bva03g02234 313 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 306 - -
Bva03g02234 313 Gene3D - 38 96 - -
Bva03g02234 313 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Bva03g02234 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Bva03g02234 313 Pfam MYB-CC type transfactor, LHEQLE motif 134 177 IPR025756 -
Bva03g02234 313 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02234 Bva-Chr3 19499515 19503303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02234 28 258 G2-like Transcription Factor Family AT3G24120 48.361 1.77e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva03g02234 Myb_CC_LHEQLE 6.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02234 - - gmx:100786397 435.261