Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02228 ATGGGTCGCAATTCTGTTACTTCAATTGCTCCGGGGTTCCGATTTCACCCCACCGACGAAGAACTCGTTCGTTATTACCTCAGGCGCAAAGTCTCCGGCAAAGCCTTCCGCTTCGATCCAATTGGAGACATCGACATCTACAAGTCCGAACCTTGGGACCTCCCATCTCAGTCGAAGCTTAAGAGCAGGGACTTAGAGTGGTACTTCTTCAGTGCGTTGGACAAGAAGTATGGAAATTCGTCTAGGACGAATCGGGCCACTGAAAAAGGGTACTGGAAGACAACGGGGAAAGATCGGCCAGTGCGCCACAGTTCCCGAATTGTTGGGATGAAGAAGACCCTGGTTTATCATTCTGGGAGGGCACCACGTGGTGCCCGTAGTAATTGGGTCATGCATGAGTACAGACTGGCTGATGAAGAATTGGCAAATAAAGGCATACAGCAGGATGCCTTTGTGCTTTGTAGGATTTTCCAGAAAAGTGGTACAGGGCCAAAGAATGGAGAACAATATGGTGCCCCATTTTTAGAAGAGGAATGGGAAAATGATGAGGTGGCTCCACCTGGTGAAGAGTTTGGTGAAGAGGATGTGCTGTTTGGTGATGGTGCTTATGTTGAAACAAACGACCTTGAGCAGAAACTTGATATGGTCATTGCATGTGAAAGTAATTCTGTTCCAAAGAACTTTGTTTGTGGGGAGAGTAGTAGCTATCCTGAGCAGTCCCAGGGATTTGAATATCAGAGGCCCGTGGTGGGCACTGATGGAACTTTTGAGCCTCAAGATGATCAGTTCTTGAATATGGTTGATCATTTCCAAGAATTCATCGAAGAACAGAAGCCTAATGTAGGCATGGATGGAGCTTTTGAACCTCATCATGCTCAGTTTTTTGATATGCCCAAGCCTGATATGGTTAGCGAAAATGTTAAAGATAACTACACTGAAGCAAGCCATGATGAGAATGCTTTGAATTTCAATTATGCACTGGATGACCTATATTTAGATGCTGCTGATGTTCTTCCAATATTTGATGGCTCATTCCTTGAAGCCAATGATCTCGTAAACCCCATTGAAACCAATGATCTTGTAAACCCCATTGGAGCAGACCCTGCTGGTGTTGAGATGGTTGACGACTATCTTTCATTCTTTGACAATGAAGATGATATCACCCAGTATATATCCTTTGATTCTCCGGATATAATGGGGACAGAGAATCCTGTTCCTGACCAAACACAACCATTTACTGAACAGAAGGCGAATGAAGGAAGTGAGGATGCTTCCATGGCAAACAAACATGATCTAGAAGCTCATTGTAGCAATGAAGCATCCTCTTCAAAGCAGAAGACAGATGACTCAAAATTGGTATCAGGAAACACTTTCATGTATACTGGCAAGTG 1391 0.4443 MGRNSVTSIAPGFRFHPTDEELVRYYLRRKVSGKAFRFDPIGDIDIYKSEPWDLPSQSKLKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSSRIVGMKKTLVYHSGRAPRGARSNWVMHEYRLADEELANKGIQQDAFVLCRIFQKSGTGPKNGEQYGAPFLEEEWENDEVAPPGEEFGEEDVLFGDGAYVETNDLEQKLDMVIACESNSVPKNFVCGESSSYPEQSQGFEYQRPVVGTDGTFEPQDDQFLNMVDHFQEFIEEQKPNVGMDGAFEPHHAQFFDMPKPDMVSENVKDNYTEASHDENALNFNYALDDLYLDAADVLPIFDGSFLEANDLVNPIETNDLVNPIGADPAGVEMVDDYLSFFDNEDDITQYISFDSPDIMGTENPVPDQTQPFTEQKANEGSEDASMANKHDLEAHCSNEASSSKQKTDDSKLVSGNTFMYTGK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02228 463 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Bva03g02228 463 MobiDBLite consensus disorder prediction 423 446 - -
Bva03g02228 463 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
Bva03g02228 463 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Bva03g02228 463 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78 1 452 - -
Bva03g02228 463 MobiDBLite consensus disorder prediction 398 463 - -
Bva03g02228 463 MobiDBLite consensus disorder prediction 447 463 - -
Bva03g02228 463 MobiDBLite consensus disorder prediction 398 422 - -
Bva03g02228 463 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Bva03g02228 463 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02228 Bva-Chr3 19470687 19474191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02228 1 448 NAC Transcription Factor Family AT5G04410 47.300 3.07e-122 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g02228 NAM 8.2e-37 No_clan