Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02226 ATGTCAGCTGAGGTAGCTTGGCCTGCCATTGTTGAAGAATCTGGCAAATCTCTGCAACCATTTGATAAGAGGAGTGGATATGATTCAAAAACAGGCATATATCACTCTCTTGTAAGTCTTCGTCCCCAGCTTGAAATCCCAACGACGCCTGATCTTGACACAACAAGTTTTGTTCTATCACAGTTTCCTTGTGCACACCTTGCTGAGACAATAACTGCCTTCATTGATTCAAGCACTAATCATCATCTAAGCTATGGTGAGCTTCGCCGCTCTATTTTCTCCCTTGCATCAGGCTTGTACCATGGACTTGGGGTCAGGAAAGGAGATGTGGTGTTTGTGCTGTCACCAAACTCACTTTCGTACCCAACAATATGCCTTGCTGTGCTATCAATCGGAGCAATTTTCACCACTGCCAATCCCCTTAATAGCCCCACAGAAATTGCTAAGCAAGCACGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGAGGAGCTACATAAATTGACCCCAACTGGATTGCGTACAATTCTCACTTGTCCTTCCTCTGATGGTGATGGACCAAAGATGTTATCTATTGAAGAGTTAATACAAGGCTGCTCTAACCCAATAGAGTTGCCTCAATCTCAGGTAGTCCAATCGGACTCTGCAGCTATTCTTTACTCGTCAGGAACAACTGGGATAAGCAAAGGTGTAGTTTTGACTCATGCAAATCTAATTTCTATGATAAGATTAATCCAATGGGCTGTGAATGTATCCGCATCTCAAGATGATGTCTTCTTAAACTTCATTCCGATGTTCCACATTTATGGACTCACTTTCTTTGGGTTAAGTTTGTTGTGCATGAGTATAACAAGTGTAGTAATGCAGAAATTTGATTTCACAACTATGCTTGCTGCAATTGAGACTCACAAAGTGAATAACATACCAGCCGTGCCTCCTGTGATTCTTGCAATGGCAAAACATGCAAGCAAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGAGTGGGTTCAGGTGCCGCACCTTTGAGTAAGGAAGTGGAAAGGGAGTTCAGGCAGAGGTTTCCTTGGGTTGAGTTAAGGCAAGGCTATGGACTTACAGAAAGCGGTGGTCCCGCAACTTTTTCTGCATCAAATGAAGATGCTAAGACAAGACCAGATTCATGTGGGAGGCTACTTCCAAGATTTTATGCCAAAGTAGTGGACATTGAAACAGGAAAACCTTTACCTCCTCTTAAAGAAGGAGAATTATGGCTAAAAAGTCCAACCATTATGAAAGAATATCTGGGGAATTTGGAGGCTACAACTGCAACAGTTGACCCAGGGGGATGGTTGAGGACAGGTGATCTTGGCTATATTGATGAAGATGGATTTGTACATATAGTTGAACGTATTAAGGAGCTGATCAAGCATAAAGGGTATCAGGTAGCTCCTGCAGAACTGGAATCTGTATTGCTCAGTCATCCAATGATTCTTGATGCTGCTGTTATCCCggttgaagatgaagaaactgGACAGATACCAATGGCATATGTGGTGAGAGCAGCAGGTTCTGAGCTCACAGAAGACCAAGTTATTCAATATGTTTCCAGCCAGGTGGCCCCATATAAGAAAGTACGAAGGGTAAGTTTCATCGACACCATTCCAAAGTCTGCTGCTGGCAAAATCTTGCGCAAGGATCTTGTTTCTCAAACCAAAAATCAACTTGTCTCCAAGTTGTG 1721 0.4277 MSAEVAWPAIVEESGKSLQPFDKRSGYDSKTGIYHSLVSLRPQLEIPTTPDLDTTSFVLSQFPCAHLAETITAFIDSSTNHHLSYGELRRSIFSLASGLYHGLGVRKGDVVFVLSPNSLSYPTICLAVLSIGAIFTTANPLNSPTEIAKQARDSGAKLAISAPEELHKLTPTGLRTILTCPSSDGDGPKMLSIEELIQGCSNPIELPQSQVVQSDSAAILYSSGTTGISKGVVLTHANLISMIRLIQWAVNVSASQDDVFLNFIPMFHIYGLTFFGLSLLCMSITSVVMQKFDFTTMLAAIETHKVNNIPAVPPVILAMAKHASKARCDLSSLRRVGSGAAPLSKEVEREFRQRFPWVELRQGYGLTESGGPATFSASNEDAKTRPDSCGRLLPRFYAKVVDIETGKPLPPLKEGELWLKSPTIMKEYLGNLEATTATVDPGGWLRTGDLGYIDEDGFVHIVERIKELIKHKGYQVAPAELESVLLSHPMILDAAVIPVEDEETGQIPMAYVVRAAGSELTEDQVIQYVSSQVAPYKKVRRVSFIDTIPKSAAGKILRKDLVSQTKNQLVSKL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02226 573 SUPERFAMILY Acetyl-CoA synthetase-like 72 567 - -
Bva03g02226 573 Pfam AMP-binding enzyme 72 470 IPR000873 -
Bva03g02226 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 572 - -
Bva03g02226 573 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 572 - -
Bva03g02226 573 Gene3D - 39 466 IPR042099 -
Bva03g02226 573 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Bva03g02226 573 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Bva03g02226 573 Gene3D - 467 571 IPR045851 -
Bva03g02226 573 CDD 4CL 46 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02226 Bva-Chr3 19461383 19463520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02226 22 569 Monolignol Biosynthesis Gene Families AT1G20500 44.604 6.22e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02226 K10526 - gmx:100783104 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02540 04 22859071 22863181 Bva03g02226 03 19461383 19463520 ECH
Bva03g02226 03 19461383 19463520 Bva03g02226 03 19461383 19463520 ECH