Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02212 ATGAACTGTCTTCAGAATCTTCCTCGATCCTCTGCTTTTCCCTTCCAAAGTTTCAGATGCAACCAAAGGAAGCTTTCCTCCTCTGCTAATTCACTGGAAATTATCAATACTTCTAATATAAATCGAAGTATAACAATGAAGTCTGCTTCTGGTTCTATGTCCAGTTCAGAGTTGAGTAATGCCAATATGAAGGAGGAGAAGTCTGACACATATAGTCATAACATGACTGAAGCCATGGGTGCTGTCTTGACCTATAGGCATGAATTGGGAATGAACTACAACTTCATCTGTCCAGACTTAATTGTTGGGTCATGCTTACAGACTCCTGAAGATGTTGATAAGCTCCGCAAGATAGGTGTAAAGACAATATTTTGCTTGCAACAAGACCCTGATCTAGAATATTTTGGAGTTGATATCAATGCCATACGAGAGTATGCCAAGGCATGCAATGACATTCAGCACTTGCGTGCTCAAATAAGGGACTTCAATGCGTTCGATTTACGGATGCGGCTTCCAGCTGTAGTTAGCAAATTATGCAAGGCAATAAATCGCAATGGGGGAGTCACATACATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCATTAGCATATATGTTTTGGGTTCAGGGTTATATACTTAATGAAGCTCATCGACTGCTTCAGAGTAAACGGTCATGTTTCCCAAAATTGGATGCCATAAAAAGTGCAACAGCTGATATTctTACGGGCCTCAGTAAAAAGATTGTTACTTTGAAATGGGAAGGCCACAATTGCACGACAGTGGAAATTTCTGGACTTGATATTGGATGGGGCCAGAGAATGCCTCTAAGATTTTATGACAAACAAGGTGTATGGCTTCTCGAGAGGGAATTACCTGAAGGAAGCTATGAGTACAAGTACATTGTTGATGGGAATTGGACTTGCAATAAGGATGAACACGTGACCTCTCCGAACAAAGATGGCCATgccaataatttaattcagGTCCTCGAAGATCCCAGCAGTGTTCGTGCATCCCTTAGGAAGAGATTGACTGGTGATGATCCTGATCTTCCAAAAGAAGAACGACTGATAATAAGACGGTTTCTTGAAGATTGCCCTGATGACGAAGAATA 1124 0.4101 MNCLQNLPRSSAFPFQSFRCNQRKLSSSANSLEIINTSNINRSITMKSASGSMSSSELSNANMKEEKSDTYSHNMTEAMGAVLTYRHELGMNYNFICPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDINAIREYAKACNDIQHLRAQIRDFNAFDLRMRLPAVVSKLCKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYILNEAHRLLQSKRSCFPKLDAIKSATADILTGLSKKIVTLKWEGHNCTTVEISGLDIGWGQRMPLRFYDKQGVWLLERELPEGSYEYKYIVDGNWTCNKDEHVTSPNKDGHANNLIQVLEDPSSVRASLRKRLTGDDPDLPKEERLIIRRFLEDCPDDEE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02212 374 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 373 - -
Bva03g02212 374 Pfam Glycogen recognition site of AMP-activated protein kinase 252 335 IPR032640 -
Bva03g02212 374 SMART dsp_5 92 242 IPR020422 GO:0006470|GO:0008138
Bva03g02212 374 Pfam Dual specificity phosphatase, catalytic domain 135 230 IPR000340 GO:0008138|GO:0016311
Bva03g02212 374 SUPERFAMILY E set domains 251 332 IPR014756 -
Bva03g02212 374 CDD E_set_AMPKbeta_like_N 252 332 - -
Bva03g02212 374 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 234 IPR029021 -
Bva03g02212 374 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470|GO:0008138
Bva03g02212 374 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 227 IPR000387 GO:0016311|GO:0016791
Bva03g02212 374 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 373 IPR030079 GO:0005982|GO:0007623|GO:0019203
Bva03g02212 374 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203|GO:0046838
Bva03g02212 374 Gene3D Immunoglobulins 247 337 IPR013783 -
Bva03g02212 374 Gene3D Protein tyrosine phosphatase superfamily 85 365 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02212 Bva-Chr3 19362266 19368541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02212 91 373 Protein tyrosine phosphatase (PTP) family AT3G52180 69.258 5.54e-149 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02212 - - gmx:100804010 572.392