Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02208 ATGTTGGCAATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAGGGGAATTCTTCTAATGGTGGGAGTGTGCAGAGATCTAAGAGCTTCGCCTTTAGAGCTCCTCAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTTTATGCCTTGAAGATcatggacaaaaaatttattactaaagaGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTACTTGATCAATTGGACCATCCTGGCATTGTGCGGctatttttcacatttcaagATTCATTTTCTCTGTACATGGCACTTGAGTCCTGTGAAGGTGGAGAACTCTTTGATCAAATAACCAGGAAAGGTCGTCTGTCAGAGGAAGAAGCACGGTTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACGTACATAATTTGGGATTAATACATCGTGATATTAAGCCAGAGAACTTGTTACTCACGGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCAATGCAGGACAGCCAAATCACTGTCCTTCCAAATGCATCATCAGATGATAAGGCCTGCACGTTTGTGGGAACAGCTGCTTATGTACCTCCAGAGGTTCTCAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGATGCACATTATACCAAATGCTTTCTGGAACATCTCCTTTTAAAGATGCGAGTGAATGGCTCATTTTCCAAAGAATTATAGCCAGAGATATTCGATTTCCAGATTATTTTTCTGATGAAGCAAGAGACTTAATTGACTGCTTATTGGATTTGGATCCCAGCAGGAGACCGGGTGCAGGACGTGATGGTTATGCTGTTTTGAAAGTGCATCCCTTTTTCAAGGGAGTTGACTGGGATAACTTAAGGGCACAAACCCCTCCTAGACTTGCTCTGGAACCAGGGgCTCCGTCACCTGAGGGTGATGATGTTCAGGATTCAGCTTGGAATCCTAGTCACGTAGGGGATGGTTATGCTAGACAGCCTGTTGGAAATACTGGTGCTGCATCATCTTCTGAAGGGACTGGTCACATTACTAGGCTGGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAATCTGTTCTGATGATCTCAATGGTGAAGAAATTACAGAAACTAACTAGCAAGAAGGTGCAGCTCATCCTTACAAACAAGCCAAAGTTGATCTATGTGGACCCATCAAAGCTAATGGTGAAGGGAAATATAATATGGTCAGATAATCCGAATGATCTAACCATCCAAGTTATCAGTCCTTCGCATTTCAAGATTGTCACGCCAAAAAAGGTGCTTTCATTTGAGGATGCAAAACAAAGAGCATCACAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTG 1469 0.4139 MLAMEKDFDSKLKIQGNSSNGGSVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDSFSLYMALESCEGGELFDQITRKGRLSEEEARFYAAEVVDALEYVHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNASSDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDCLLDLDPSRRPGAGRDGYAVLKVHPFFKGVDWDNLRAQTPPRLALEPGAPSPEGDDVQDSAWNPSHVGDGYARQPVGNTGAASSSEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLMVKGNIIWSDNPNDLTIQVISPSHFKIVTPKKVLSFEDAKQRASQWKKAIEGLQNR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02208 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Bva03g02208 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bva03g02208 489 Gene3D - 366 489 IPR011993 -
Bva03g02208 489 Pfam PH domain 386 488 IPR033931 -
Bva03g02208 489 MobiDBLite consensus disorder prediction 1 25 - -
Bva03g02208 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 485 - -
Bva03g02208 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bva03g02208 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 485 - -
Bva03g02208 489 SUPERFAMILY PH domain-like 305 488 - -
Bva03g02208 489 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02208 489 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
Bva03g02208 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02208 489 Pfam Protein kinase domain 46 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02208 489 Coils Coil 469 489 - -
Bva03g02208 489 SUPERFAMILY Protein kinase-like (PK-like) 28 328 IPR011009 -
Bva03g02208 489 MobiDBLite consensus disorder prediction 325 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02208 Bva-Chr3 19325275 19333004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02208 1 489 AGC Kinase Gene Family AT3G10540 83.333 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Bva03g02208 Pkinase 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02208 K06276 - gmx:100801891 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02208 03 19325275 19333004 Bva03g02208 03 19325275 19333004 ECH