Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02195 ATGGCCACTGAGGACTTCCCTCTTCTCGACTCCCCTTCTCATCACCCGCACTCGCAGCCTCACCTCCACGCGCACACGCGCCACtttccttcctcttcttcctctagCCCCACCAGAGTCCCCACCTCCGCTGATGCCGGCGACTCCGCTAACGGCGACTACTATCCTCAACCTTTCAACGACGACGCCGATGATTCTTCTGACCCGAATAAATCCGGTCCCGGACTCCCAACCCCTAATTCGAAGCGCGCTTCCACCACCGCCAATAGCCCTTATTATTACAACAAGAAGTTAAAACAGTCCGCTCCCAGTGCCGTCGGCGGTGCTACGAGCGCCGATCCCGATTCAGGAGCCGACGCGACGTACCGGGTCGATTACCGAAAGGATCGCGAGGAATGGACCGACACTGCCATCGCTATTCTCCTCGACGCGTATACGGAGAAATTCAACCAGCTGAACCGAGGAAATCTTCGGGGACGCGATTGGGAGGAGGTGGCGGAAGCAGTGACTGAGCGATGTGGGACTGGCGGCATTGATGGCAAGCATAAATCGTATAAGAGTGTTGAGCAGTGCAAGAACAAGATTGATAATTTGAAGAAGAGGTACAAGGTAGAGCTTCAGAGGATAACTAGTGGCGGCATGACCACGAGTCACTGGCACTGGTTTAAGAAGATTGAAGCCATTGTTGGCAACTCCATGACTGTGAAGACTCTGTCAGACGACGAGAAGGTTACTGGAGCGAACTCCTCCTCCATCACGGGGCAACCCAAGAATAGATATACACCTAGCAATTCTGCATTGGTGAACAACGTGAAACCGAAGCCagcatcaaatttaaaatggcGGAGAGTTGTTTTCAAAATTAGTGGTTCTGCGTTGGCTGGAAATTGCCAGAGTATTGACCCCAAGGTAGCTATGCAGATTGCTCGGGAAGTGGCAACAGCTTGTCGCCTTGGGGTAGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACTGGGTTGGATAGACCTATGGCATACCAAATTGGCATGATGGCAACGGTTATGAATTCCATTCTGCTTCAATCTGCTCTGGATAAGCTGGGTGTTCAGGCACGTGTGCAGAGTGCATTTTCAATGCCAGAGGTCGCTGAACCATATAGTAGGCAACGAGCTATTCGACATCTTGAGAAAGGCAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTCTTTACTACCGATACAGCTGCAGCTCTGAGAGCTTCTGAGCTTAATGCAGATGCGGTTCTAAAAGGTACAAACGTTAACGGTATCTATGACTGCCATGGTGGTAACGATAATGTGACACTATATCACATTTCGTTTAGAGAACTTGTTTCCAGGGGCACCACCTGCATGGACATGATGGCAGTAGCATACTGTGAAGAGAATGAAATTCCTGTTGTAATTTTCAACTTGCTGGAACCGGGGAATATTTCAAGAGCATTATGTGGAGATCAAGTTGGTACGTTGATTGACCAAACAGGAAGGATTAGCTG 1559 0.4894 MATEDFPLLDSPSHHPHSQPHLHAHTRHFPSSSSSSPTRVPTSADAGDSANGDYYPQPFNDDADDSSDPNKSGPGLPTPNSKRASTTANSPYYYNKKLKQSAPSAVGGATSADPDSGADATYRVDYRKDREEWTDTAIAILLDAYTEKFNQLNRGNLRGRDWEEVAEAVTERCGTGGIDGKHKSYKSVEQCKNKIDNLKKRYKVELQRITSGGMTTSHWHWFKKIEAIVGNSMTVKTLSDDEKVTGANSSSITGQPKNRYTPSNSALVNNVKPKPASNLKWRRVVFKISGSALAGNCQSIDPKVAMQIAREVATACRLGVEVAIVVGGRNFFCGDAWVSATGLDRPMAYQIGMMATVMNSILLQSALDKLGVQARVQSAFSMPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAVLKGTNVNGIYDCHGGNDNVTLYHISFRELVSRGTTCMDMMAVAYCEENEIPVVIFNLLEPGNISRALCGDQVGTLIDQTGRIS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02195 519 Gene3D - 272 518 IPR036393 -
Bva03g02195 519 MobiDBLite consensus disorder prediction 100 119 - -
Bva03g02195 519 Pfam Myb/SANT-like DNA-binding domain 130 228 IPR044822 -
Bva03g02195 519 Gene3D - 133 204 - -
Bva03g02195 519 Hamap Uridylate kinase [pyrH]. 279 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bva03g02195 519 MobiDBLite consensus disorder prediction 1 88 - -
Bva03g02195 519 Pfam Amino acid kinase family 283 492 IPR001048 -
Bva03g02195 519 SUPERFAMILY Carbamate kinase-like 280 512 IPR036393 -
Bva03g02195 519 Coils Coil 188 208 - -
Bva03g02195 519 MobiDBLite consensus disorder prediction 25 45 - -
Bva03g02195 519 PANTHER URIDYLATE KINASE 1 519 - -
Bva03g02195 519 PANTHER KINASE, PUTATIVE-RELATED 1 519 - -
Bva03g02195 519 CDD AAK_UMPK-PyrH-Ec 282 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bva03g02195 519 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02195 Bva-Chr3 19248641 19251596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02195 133 237 Trihelix Transcription Factor Family AT3G14180 40.952 6.71e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva03g02195 AA_kinase 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02195 - - gmx:100791426 749.584