LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g02179	ATGAGTGACCATTATGGGCTGCCGGATCTACGGCAGCTCATATCAGGAAGAACTCATTTACGCACAAACCCGCTTCTTCAAGAGCCGCTTGCTATCCACTGCAGCTTGGGTTCTTCTCCTGCTCCTCCACCCAACAGCTATGAACACGTCATAGCTGGTGACGTTTTCTCTCGCGGGTTTGCTCAGTTTCCTCTTCATGACTATTCCTCTAGCGTTAACCCCACTAACGCTTCTACCACTAGCAGTGGTTCGGATGCATTTTGCAGCATAGAGGCTGCAGAAAAGGGGTGGCTTGGATTCGATGCTGGCCTAAACAACAGGTGGCCAAGACAAGAGACTCTTTCCCTTCTAGAGATCAGATCCCGTCTTGATTCCAAGTTCAGAGAGACCAATCAGAAAGGACCATTATGGAATGAAGTTTCTAGGATAATGGGAGAGGAATATGGATACCaaagaagtggaaagaaatgcaaagagaagtttgagaatttGTACAAGTATTACAAGAAGACGAAGGAAGGTAAAGCTGGTAGACAAGATGGGAAGCACTATAGATTCTTTCGCCAACTTGAAGCAATATGTGGGGAAACAAGCAGTAACCATGCTGCTTCAACTTCACCAGAAACATTAACCCACAATTATGGTAATAGAAACACAAACAATATTGTAACTCCCTTTGATCAAACCCCAAGCATCACCATCAACCAAGACAGTGATGCTGCTCTTCCCCATAACCATAACCTTAAATGCTCCGAGAGCCTTAGCATCTCGAATTCATCCGAATTCGAGACATCCTCGTCGGATAACAACGACGAGGATCTCTCGGCCATTGCCTACATGATGAAACAATCAAGGAATATTGAGAAGCAGAAGGGGCTTAACTGCCAGAGACAAGTTCAAGGAAGGGAAAGGAGAAGAAACTGGAAAGCCAAGGTGGAGGAGCTTGTTGACACCCAAATGAAGAAGCTGATAGAGACTCAAGATGCTTGGATGGAGAAGATGTTAAGTGTTATCGAACACAGAGAACAAGAAATGGCCactaaggaagaagaaagaaagaagagggaATCAATGAGGTTTGATAGAGAAGTGCATGAGCTTTGGGCTAAAGAGAGAGCTTGGGTTGAAGCAAGAGATGCTGCATTAATGGAGGTTGTGAAGAAACATATGGGAAAAGGGTCACTTGAATCATTGCCATTAGCTGAACCCAAGAATATTGAGAACAAGAGCCACGAGGAGAACTACCCTTGTGAAGCTGGTGACCTTAGCAATAATGGGTGGACAGAATTAGAAATCTCAAATTTGATACAGCTGAAGAATGGGTTTGAGATGAGATTCCAACAAGAAAGTGGGTATTTAGAGAACGGCGTCGTTTGGGAAGAAATAGCAGGAAAAATGGCTTGTTTAGGCTTTGATAGGAGTGCCAAGGAGTGCAAGCAAATATGGGATGAGATCAGCATGTCTCTAAGCAAAACAAGGCCTTTGAGTGTGGGACTTCACCTGACGGACAATGACCTTTCACGTTCGAGTTCTAACGCTGCAGCTGCAGGCAGCAGATCAGGTTATGCATG	1571	0.4316	MRFQQESGYLENGVVWEEIAGKMACLGFDRSAKECKQIWDEISMSLSKTRPLSVGLHLTDNDLSRSSSNAAAAGSRSGYA	80

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g02179	80	Pfam	Myb/SANT-like DNA-binding domain	7	47	IPR044822	-
	Bva03g02179	80	MobiDBLite	consensus disorder prediction	60	80	-	-
	Bva03g02179	80	Gene3D	-	1	49	-	-
	Bva03g02179	80	MobiDBLite	consensus disorder prediction	60	74	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g02179	Bva-Chr3	19161668	19164460	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva03g02179	1	50	Trihelix Transcription Factor Family	AT1G76880	39.623	1.37e-07	45.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Bva03g02179		Myb_DNA-bind_4	2.4e-06	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g02179	-		-	gmx:100787750	82.8037