Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02170 ATGGAGGAAACATTGGATTTAGATGATGTTGTGAGATCAGTAAGCAGCTTGAGGATGAGCATTGGGTCAATCAGCAGGAGGAGTTGGGCTTCAGAAAGTCTCAGAGAAGGTTGGAGTGGACAAGGTGATGTTTTCCAGAGAAGTAAagaggaagatgatgatgaagagctCAAGTGGGCAGCCATAGAAAGGCTTCCAACCTTTGAAAGACTAAAGAAAGGATTTTTGAAGCAACTGTTAGATAATGGGaaacttaaatataaagagGTTGATTTCACCAAGCTTGGCATGGAGGCAAAGAAGCATATTCTGAATGCTATACTGAAGACTCTTGAACAAGACAATGAGAATTTTCTTTGCCGGCTCAGGGAAAGAATTGATAGGGTTGGAGTAGAGGTTCCTCAAATTGAAGTCAGATTTGAGCATCTATCAGTAAAAGGGGATGCATATACTGGAACTAGAGCACTGCCAACACTAGTGAATTCTGCAATGAATGCAATAGAGGAAATCCTTGGATCAATCAAGCTTCTCCCATCTAAGAAAAAGGTTGTTCAGATACTCCAAGATGTCAGTGGAATCATAAAACCATCAAGAATGACTTTGCTTCTGGGGCCACCAGGATCAGGAAAAACTACACTTCTAAAGGCACTTGCTGGGAAAATGGACAAGGATTTAAGGGTATCAGGAAAAGTCACATACTGTGGTCATGAATTATCAGAGTTTGTTCCTCATAGAACATGTGCTTATATTAGCCAGCATGATCTTCATCAAGGAGAACTGACAGTGAGAGAGACATTGGATTTTTCCGGGCGCTGCTTGGGAGTTGGAACTAGGTATGATCTGCTGGTGGAACTGTCGAGACGAGAAAAGGAAGCAGGAATCAAACCAGACCCAGAAATAGATGCCTTTATGAAAGCCACCGCAGTAGCAGGTCAAGAAGCAAGTCTTGTTACAGATTATGTTCTCAAGATTCTTGGATTGGAAACATGTGCTGATACTCTGGTGGGAAATGAGATGATAAGAGGCTTATCTGGTGGAGAAAAGAAGCGTTTAACAACCGGTGAAATGTTGGTAGGACCTGCAAAAGTTTTCTTCATGGATGGAATTTCAACTGGGTTTGCTCCTGCTGCTAGTAGGTTTTTCCGTCAATTATTGGCACTTTTCGGTGTGCATCAAATGGCTATATCTCTTTTCCGGTTCATTGCTGCAATTGGAAGAGTACAAATTGTGGCAAATACAATTGGTTCATTTGTATTGCTAGTTATATTCATCCTTGGTGGCTTCATTATTGCCAAAGATAACATTGAACCATGGCTTCTATGGTGCTATTATGCTACTCCTATGATGTATGGACAAAATGCCATAGCCATCAATGAATTCCTTGACAAAAGATGGAGTGCaCCTAATATTGACCCAAGTATTCCTGAGCCAACAGTTGGGAAAGCACTTCTCAGGGCCAGAAGTATGTTTACTGAGGACTATTGGTACTGGATTGCTGTTGGTGCTCTTCTAGGCTTTTCTCTCCTTTACAACATTTGTTTCATCGTCGCTCTGACATTTCTTGATCCATTCATAGATTCTAAATCTGTTATTGTGGAGGATGAAGGGAAAAGGGCAAGCATGTGCGAGTCATCCTCTATTCCACAAAAGGATAAAACAACCACAAAAGatccttcttcttcaactgcTAAATTGTCTCAAGGAGTCCATATATCAGGAAAAAACACCAAAGACAGCTCAAGTCCAAAAGCAGCAGAGAGTGAAACAACCAAGAGGGGAATGGTGTTACCCTTTCAACCTCTATCACTTGCTttcaatcatattaattactatattgATATGCCAGCAAAAATGAAGACGCGAGGAGCTGAAGGGAAACGGCTCCAACTACTAAGAGATGTCTGTGGCACCTTCAGGCCTGGAGTTCTAACATCGTTAGTTGGTGTAACAGGTGCTGGAAAAACCACTTTGATGGATGTGCTTGCAGGAAGAAAAACTGGGGGTTATATTGAAGGAAGCATCAGCATATCTGGTTTTCCAAAGAACCAGGCAACTTTTGCTCGGATCAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTCACAGTCTACGAGTCTCTCATGTTTTCGGCTTGGTTGCGTCTTGGTAGGGAGATTAACACAGAAACAAAGAAGATGTTTGTAGAGGAAGTTATGGAGCTTGTTGAGCTTGTTCCAGTGAGGAATTTTCTAGTAGGCCTTCCAGGGATTAGTGGTTTATcaatagaacaaagaaagagattgaCCATTGCAGTAGAATTGGTTGCCAATCCCTCTATTATCTTTATGGATGAACCCACTTCTGGCCTTGATGCTAGAGCTGCAGCAATTGTTTTGCGCACAGTAAGGAATACAGTAGATACAGGGAGAACAGTTGTCTGCACAATTCATCAACCCAGTATTGACATATTTGAAGCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAGTCTTATACGCTGGTCCACTTGGTCGAAATTCTCGTAAGCTTATAGAGTATTTTGAAGCTATTCCAGGAGTTCCCAAGATCAAAGATGGATATAATCCAGCCACATGGATGTTGGAGATCAGTTCTCCAGCAGTTGAGTCTCAGCTTGGTGTAGACTTTGCAGAATTATATGCTAATTCAGCATTGTATCAGAAGAACCAGGAACTTATTAAAGATCTAAGCACATCACCACCAGGAGGAAAAGATCTTTACTTTCCAAATAAGTACTCCCAATCCTTCATTACTCAATGCAAAGCTTGCTTCTGGAAACAATACTGGTCCTATTGGAGGAACCCACCTTATAATACCATCCGGATGTTCACAACAATAATTGTTGGTCTCATTTTTGGACTCTTTTTCTGGAACAAAGGAGATAAAATACATAAAGAACAAGACCTGCTGAATATTTTGGGAGCTATGTATGCTGCTATTTTATTCCTCGGAGGCATCAATACCACCAGTGCACAACCTGTAGTTGCAACTGAAAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCGGCTTTACCTTATGCATTTGctcagGTAGCAATAGAGTTGATTTATGTTGGAATCCAAACCTTTGTCTATTCTCTTATCCTTTTCTGCATGATGGGGTTCAGTTGGCAAGTTGACAAGTTCTTGTGGTTCTACTACTTCATGTTCATGTCCTTTGTCTACTTCACACTCTATGGAATGATGACTGTAGCCCTCACACCAAACCACCAAATTGCTGCAGTTGTCATGTCATTCTTTCTCGTTTTCTGGAACTTGTTCACCGGCTTTATTATCCCAAGAaagCAAATTCCAATATGGTGGAGATGGTTTTATTGGGCATCCCCACCAGCTTGGACTATATATGGACTTGTGACTTCCCAGATGGGAGATGAGAATTCTTCATTAGAGGTTCCTGGATTAAGGAACATATCAGTAAAAGTTTACCTTGAGGAGCGATTAGGGTTTGAATATGACTTCCTTGGAGTCGTTGCTGTGGCTCATATTCTTTTcgtttttatcttcgtttttgTATTTGCATATGGcattaaattctttaatttccaGAGGAAATG 3614 0.3965 MEETLDLDDVVRSVSSLRMSIGSISRRSWASESLREGWSGQGDVFQRSKEEDDDEELKWAAIERLPTFERLKKGFLKQLLDNGKLKYKEVDFTKLGMEAKKHILNAILKTLEQDNENFLCRLRERIDRVGVEVPQIEVRFEHLSVKGDAYTGTRALPTLVNSAMNAIEEILGSIKLLPSKKKVVQILQDVSGIIKPSRMTLLLGPPGSGKTTLLKALAGKMDKDLRVSGKVTYCGHELSEFVPHRTCAYISQHDLHQGELTVRETLDFSGRCLGVGTRYDLLVELSRREKEAGIKPDPEIDAFMKATAVAGQEASLVTDYVLKILGLETCADTLVGNEMIRGLSGGEKKRLTTGEMLVGPAKVFFMDGISTGFAPAASRFFRQLLALFGVHQMAISLFRFIAAIGRVQIVANTIGSFVLLVIFILGGFIIAKDNIEPWLLWCYYATPMMYGQNAIAINEFLDKRWSAPNIDPSIPEPTVGKALLRARSMFTEDYWYWIAVGALLGFSLLYNICFIVALTFLDPFIDSKSVIVEDEGKRASMCESSSIPQKDKTTTKDPSSSTAKLSQGVHISGKNTKDSSSPKAAESETTKRGMVLPFQPLSLAFNHINYYIDMPAKMKTRGAEGKRLQLLRDVCGTFRPGVLTSLVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGFPKNQATFARISGYCEQNDIHSPNVTVYESLMFSAWLRLGREINTETKKMFVEEVMELVELVPVRNFLVGLPGISGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVLRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVLYAGPLGRNSRKLIEYFEAIPGVPKIKDGYNPATWMLEISSPAVESQLGVDFAELYANSALYQKNQELIKDLSTSPPGGKDLYFPNKYSQSFITQCKACFWKQYWSYWRNPPYNTIRMFTTIIVGLIFGLFFWNKGDKIHKEQDLLNILGAMYAAILFLGGINTTSAQPVVATERTVFYRERAAGMYSALPYAFAQVAIELIYVGIQTFVYSLILFCMMGFSWQVDKFLWFYYFMFMSFVYFTLYGMMTVALTPNHQIAAVVMSFFLVFWNLFTGFIIPRKQIPIWWRWFYWASPPAWTIYGLVTSQMGDENSSLEVPGLRNISVKVYLEERLGFEYDFLGVVAVAHILFVFIFVFVFAYGIKFFNFQRK 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02170 1204 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 171 451 IPR003439 GO:0005524
Bva03g02170 1204 MobiDBLite consensus disorder prediction 542 590 - -
Bva03g02170 1204 Pfam Plant PDR ABC transporter associated 470 531 IPR013581 -
Bva03g02170 1204 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 371 1203 - -
Bva03g02170 1204 Pfam ABC-transporter N-terminal 113 161 IPR029481 -
Bva03g02170 1204 PANTHER ATP-BINDING CASSETTE TRANSPORTER 371 1203 - -
Bva03g02170 1204 SMART AAA_5 640 832 IPR003593 -
Bva03g02170 1204 SMART AAA_5 196 415 IPR003593 -
Bva03g02170 1204 Pfam ABC-2 type transporter 928 1141 IPR013525 GO:0016020|GO:0140359
Bva03g02170 1204 Pfam ABC-2 type transporter 371 460 IPR013525 GO:0016020|GO:0140359
Bva03g02170 1204 Gene3D - 172 411 IPR027417 -
Bva03g02170 1204 Pfam ABC transporter 632 783 IPR003439 GO:0005524
Bva03g02170 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 838 IPR027417 -
Bva03g02170 1204 CDD ABCG_PDR_domain2 600 838 IPR034003 -
Bva03g02170 1204 Gene3D - 618 849 IPR027417 -
Bva03g02170 1204 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 372 - -
Bva03g02170 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 386 IPR027417 -
Bva03g02170 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 230 IPR027417 -
Bva03g02170 1204 MobiDBLite consensus disorder prediction 542 587 - -
Bva03g02170 1204 Pfam ABC transporter 187 367 IPR003439 GO:0005524
Bva03g02170 1204 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 603 855 IPR003439 GO:0005524
Bva03g02170 1204 Pfam ABC-2 type transporter 812 880 IPR043926 GO:0140359
Bva03g02170 1204 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02170 Bva-Chr3 19097723 19106436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02170 628 815 Calmodulin-binding Proteins AT2G36910 25.248 4.54e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02170 K08711 - vvi:100253970 1274.61