Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02169 ATGCCAATCATGGCAAACTTACTCGGTACCGTGACAATGCTTATTGTTTTCGTCCTTGGTGGATTCATTGTTGCCAGAGATGCTATTGGACCATGGATGATATGGGGCTATTATATTTCACCCATGATGTATGGACAGAATGCAATAGTCATCAATGAATTCCTAGACAAAAGATGGAGTGCTCCAAATACTGATTCAAGAATTCCTGAGCCCACAGTTGGGAAGGCACTTCTCAGGGCAAGAGGCTTGTTCACAGAAAACTATTGGTACTGGATATCCATTGGTGCTCTCCTGGGATTTTCCCTTCTCTTCAACGTTCTGTTCATTGCTGCTTTGACATATTTGAATCCATTTGTAGAGTCTAAATGTATTGTTGTGGATGAGGAAGACACAAGAACAAGCACGAAAGGATCATCCTCTACTGAACCGATAAAGTCTACAACTACAGAAAAGAGATCAGCTTCAACTGCTAAGATGTTTGAAGGCATTGATATGGCCATAAGGAAAAACTCAGATAGCTCAATGTCTAGACCTGCAGAGAGTGCAACAACCAAGAAGGGAATGGTGTTGCCCTTTCAGCCCCTCTCACTTGCCTTTGACCATGTGAATTACTCCATCAATATGCCAGATgaaatgaagaaacaaggGATTAAAGATAGTAGACTCCAACTGCTAAGAGATGTCAGTGGTACTTTCCGGCCTGGAATTTTAACAGCATTGGTTGGAGTAAGTGGTGCTGGAAAAACTACCTTGATGGATGTACTTGCAGGAAGAAAAACTACTGGCTATATTGAAGGAAGCATTTGCATATCTGGTTATCCGAAGAACCAAGCAACTTTTGCTCGGATTAGTGGCTATTGCGAACAGAATGATATCCATTCTCCAAATGTTACAGTCTATGaatctcttgttttttctgCTTGGCTTCGTCTTGGCGAAGAAGTTAAcgaagaaacaaagaagGCATTTGTTGAGGAAGTGATGGAGCTGGTGGAACTGAAACCATTGAGGAATTTTCGAGTCGGGCTTCCAGGAATAGATGGCTTATCAACCGTGCAGAGAAAGAGACTCACCATTGCTGTAGAACTGGTTGCCAATCCTTCCATTATCTTCATGGATGAGCCAACAACAGGTCTTGATGCTAGAGCTGCAGCAATTGTCATGCGTACTGTTAGAAATACAGTGGATACAGGACGAACCGTTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTGCTTCTAATGAAGAGGGGAGGACAACTCATATATGGTGGCCCCCTTGGTCGAAATTCACATAAGCTTATAGAGTACTTTGAAGCTATTCCAGGAGTTCCAAAGATCAAAGATGGATATAATCCTGCTACATGGATGTTAGAGATTAGTTCTCCAGTATTTGAATCTCAGCTTGATGTAGACTTAGCAAAATTATACACTACATCAGAATTGTATCGGAGGAATCAAGAACTTATCAAGGAGTTAAGCACACCAGTACCAGGAACAAAGGACCTGCACTTCCCAACAAAATACTCCCAATCCTTCTTTGAACAATGCAAAGCTTGCTTCTGGAAACAATACTGGTCCTATTGGAGGAACCCAGAATACAATGCCATCAGATTTATTATGACCGTAATTGTTGGTGTCATTTTTGGACTAATTTTCTTGAACAAAGGAGATAGAACAGACAATCAGCAAGACCTGTTTAATCTCTTGGGAGCCATGTATGCAGCTGTTATGTTCCTTGGAGCAACCAACACTCATGCTGTGCAACCTGTTGTTGCAGCAGAAAGAACGGTCTTCTACCGCGAAAGAGCAGCTGGAATGTACTCAGAACTGCCTTACACAATTGGTCAGGTAGCTGTAGAGGTAATTTATGTTGCAATCCAAACTCTAGCTTACAGCCTTATTCTATACTCCATGATTGGGTTCCAACCGCAAGTTGACAAGTTTCTTTGGTTCTACTACTTCATATTCATGTGCTTTCTATACTTCACACTCTACGGAATGATGAGTGTAGCTCTAACACCAAACCATCACATTGCTGCAATTGTCATGTCCTTCTTCATCAGTTTCTGGAACCTCTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAGTATGGTGGAGATGGTACTATTGGGCTTCACCAGTGGCATGGACGATATATGGGCTTGTAACATCTCAGGTGGGAGACAAGACCTCCCCGGTACAAGTGCCTGGACAAATACCTATATCAGTAAAAGATTTTCTTGAGGAGCATATGGGATTTGAATATGGCTTCCTTGGATATGTTGCTGTGGCTCATATTGCTTTTGcccttctcttcctctttgtATTTGCTTATGGAATCAAGTTCCTTAATTTCCAGAAGAGATA 2396 0.4061 MPIMANLLGTVTMLIVFVLGGFIVARDAIGPWMIWGYYISPMMYGQNAIVINEFLDKRWSAPNTDSRIPEPTVGKALLRARGLFTENYWYWISIGALLGFSLLFNVLFIAALTYLNPFVESKCIVVDEEDTRTSTKGSSSTEPIKSTTTEKRSASTAKMFEGIDMAIRKNSDSSMSRPAESATTKKGMVLPFQPLSLAFDHVNYSINMPDEMKKQGIKDSRLQLLRDVSGTFRPGILTALVGVSGAGKTTLMDVLAGRKTTGYIEGSICISGYPKNQATFARISGYCEQNDIHSPNVTVYESLVFSAWLRLGEEVNEETKKAFVEEVMELVELKPLRNFRVGLPGIDGLSTVQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQLIYGGPLGRNSHKLIEYFEAIPGVPKIKDGYNPATWMLEISSPVFESQLDVDLAKLYTTSELYRRNQELIKELSTPVPGTKDLHFPTKYSQSFFEQCKACFWKQYWSYWRNPEYNAIRFIMTVIVGVIFGLIFLNKGDRTDNQQDLFNLLGAMYAAVMFLGATNTHAVQPVVAAERTVFYRERAAGMYSELPYTIGQVAVEVIYVAIQTLAYSLILYSMIGFQPQVDKFLWFYYFIFMCFLYFTLYGMMSVALTPNHHIAAIVMSFFISFWNLFSGFLIPRTQIPVWWRWYYWASPVAWTIYGLVTSQVGDKTSPVQVPGQIPISVKDFLEEHMGFEYGFLGYVAVAHIAFALLFLFVFAYGIKFLNFQKR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02169 798 Pfam ABC transporter 225 376 IPR003439 GO:0005524
Bva03g02169 798 Gene3D - 209 443 IPR027417 -
Bva03g02169 798 Pfam ABC-2 type transporter 522 734 IPR013525 GO:0016020|GO:0140359
Bva03g02169 798 Pfam ABC-2 type transporter 4 54 IPR013525 GO:0016020|GO:0140359
Bva03g02169 798 Pfam Plant PDR ABC transporter associated 59 125 IPR013581 -
Bva03g02169 798 SMART AAA_5 234 426 IPR003593 -
Bva03g02169 798 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 206 449 IPR003439 GO:0005524
Bva03g02169 798 PANTHER ATP-BINDING CASSETTE TRANSPORTER 3 798 - -
Bva03g02169 798 CDD ABCG_PDR_domain2 194 432 IPR034003 -
Bva03g02169 798 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 3 798 - -
Bva03g02169 798 MobiDBLite consensus disorder prediction 136 151 - -
Bva03g02169 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 433 IPR027417 -
Bva03g02169 798 MobiDBLite consensus disorder prediction 130 151 - -
Bva03g02169 798 Pfam ABC-2 type transporter 406 470 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02169 Bva-Chr3 19088545 19092729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02169 222 409 Calmodulin-binding Proteins AT2G36910 26.733 1.41e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02169 K08711 - gmx:100788067 1258.43