Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02167 ATGAATATGGCTGAAGTAGTGACAGAAGGTGATCTTGTGAGGTCAACAAGCAATGGAATGAACAGAATTGATTCCCTTAGCAGGAAGAGTTCTGGGTCATCAACATCTGGCAGGAAAAGTTTGGCCTCGGCGAGTTTACACGAGGCTTTCTCTTTTGGTGGACAGGGTAATGTGTTTCAGAGAAGTAGGAGGGAAGATGATGCGGAGGAGTTGATGTGGGCTGCAATAGAGCGGCTTCCAACATATGACAGGCTGAGGAAGGGGATTCTGAAACAAGTTCTGGATAATGGGAAAGTTGATTATGAAGAGGTTGATATCACCAAACTTGGAAGGCGAGAAAAGAAGCACCTCTTGGAGAAAATTCTAGTTTCTGCTGAAAAGGACAATGAGAATTTTCTTCTTAGGCTAAGGGAAAGAGTTGAAAGAGTTggaattgagactccaaagATTGAAGTCAGATTTGAGCACTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGGGCACTGCCCACATTATTGAATAGTACCATGAATATAACTGAGGGTGTTCTTGGATCACTCAAGCTTCTCCCATCCAAGAAAAGGGTTGTGAAAATACTTCGAGATGTCAGTGGAATCCTGAAACCGTCAAGAATGACACTACTTCTGGGCCCTCCAGGATCAGGGAAAACTACACTGCTCTTGGCACTTGCTGGGAAAATGGACAAGAATCTAAGGCCAAATACTGATTCAAGAATTCCTGAGCCCACGGTTGGGAAGGCACTTCTCAGGGCAAGAGGCTTGTTCACAGAAAACTATTGGTACTGGATATCCATTGGTGCTCTCCTGGGATTTTCCCTTCTCTTCAACATTTTGTTCATTGCTGCTTTGACATATTTGAATCCAATTGGAAATTCTAAATCTGTTGTTGTGGATGAGGAAGacaaaagggagaaaaaggcAAGCATCAATGAATCTTCCTCCGGATACAGTCCAGCTTCAACTGATAAATTTTTAGCAGGCATTGATATGGCAGCAAGAAACAACTCAGATAGGACAATAACCAGGAAGGGAATGGTGTTGCCTTTTCATCCTCTGTCACTTTCTTTTAATCACGTGATTTACTTCATCAACATGCCAGAAgaaatgaagaaagaagggaTTGTAGAGAAACAGCTCCAACTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAATTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGGAAAACGACATTGATGGATGTACTTGCAGGAAGAAAGACTGGTGGTTATATTAAAGGAAGTATTTGCATATCTGGTTACCCAAAGAACCAAGCAACTTTTGCTCGGATCAGTGGCTACTGCGAACAAGATGATATCCACTCTCCAAATGTTACCATCTACGaatctcttgttttttctgCTTGGTTGCGGCTTGGTAAGGAAGTCaacaaagaaataaggaaGGCATTCATTGAGGAAGTTATGGAGCTGGTTGAGCTACAACCACTGAGAAATTTCAGAGTAGGTCTTCCAGGAATAGATGGTTTATCAACCGAACAGAGAAAGAGACTAACCATTGCTGTAGAATTGGTTGCCAATCCTTCCATTATCTTCATGGATGAACCAACAACAGGTCTTGATGCTAGAGCTGCAGCCATTGTCATGCGTACTGTTAGAAATACAGTGGATACAGGCCGAACCGTTGTCTGCACAATTCATCAACCCAGCATTGATATATTTGAAGCTTTTGATGagCTGCTTTTAATGAAGAGGGGAGGACAAGTCATATATGGTGGTCCCCTTGGTCGAAATTCTCATAAGCTTATAGAATACTTTGAAGCAATTCCAGGAGTTCCAAAGATCCAAGATGGACATAATCCTGCCACATGGATGTTGGACATCAGTTCTCCAGCATTTGAGTCTCAGCTTGGTGTAGATTTTGCAGAATTATACGCAAAGTCGGAATTATATCAAAAGAATCAGGAGCTAATTGAGGAGTTAAGTACACCAGCACCCGGAACGAAGGACCTGTACTTCCCATCTATGTACTCCCAATCCTTTTTTGAACAATGCAAAGCTTGCTTCTGGAAACAGTACTGGTCCTATTGGAGGAATCCAGAATATAATGCTGTTCGGTTCTTCATGACAATAGCAGTAGGTGTTGTGTTTggacttattttctttaacaaaGGAGATAAAACAAACAAGGAACAAGACCTATTGAATCTCTTGGGAGCAATGTATTCAGCTATCATTTTCCTTGGAGTCGTCAACACTAATTCTGTTCAACCAGTTGTTGCAATAGAAAGAACAGTGTTCTACCGCGAAAGAGCAGCCGGAATGTACTCAGAATTGCCTTACTCACTGGGTCAGGTAGCAATAGAGTTGATATATGTTGGAGTGCAAACTTTTGTCTATTCTCTTATCCTTTTCTCCATGATTGGGTTCACTTGGCAAGTTGACAAGTTCTTGTGGTTCTACTACTTCATATTCATGTCCTTTGTCTACTTAACACTCTATGGAATGATGACTGTAGCTCTCACACCAAACCACCAAATTGCTGCAATTGTCATGTCCTTCTTTATCAGTTTCTGGAATCTCTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATCACCTGTTGCTTGGACTATATATGGGCTTGTAACATCTCAGGTGGGAGACAAGACTTCACCAGTACAAGTGCCTGGAGAAGGGTTCATATCAGTAAAGGAATACCTTGAGAAGCATATGGgttataaatatgattttcttgGAGTTGTTGCTGCAGTTCACATTGCTTTTGTGGTACTCTTCCTTTTTGTATTTGCACATGGCATCAAGTTCTTAAATTTCcagaaaagata 2891 0.3995 MNMAEVVTEGDLVRSTSNGMNRIDSLSRKSSGSSTSGRKSLASASLHEAFSFGGQGNVFQRSRREDDAEELMWAAIERLPTYDRLRKGILKQVLDNGKVDYEEVDITKLGRREKKHLLEKILVSAEKDNENFLLRLRERVERVGIETPKIEVRFEHLSVEGDAYVGTRALPTLLNSTMNITEGVLGSLKLLPSKKRVVKILRDVSGILKPSRMTLLLGPPGSGKTTLLLALAGKMDKNLRPNTDSRIPEPTVGKALLRARGLFTENYWYWISIGALLGFSLLFNILFIAALTYLNPIGNSKSVVVDEEDKREKKASINESSSGYSPASTDKFLAGIDMAARNNSDRTITRKGMVLPFHPLSLSFNHVIYFINMPEEMKKEGIVEKQLQLLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIKGSICISGYPKNQATFARISGYCEQDDIHSPNVTIYESLVFSAWLRLGKEVNKEIRKAFIEEVMELVELQPLRNFRVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYGGPLGRNSHKLIEYFEAIPGVPKIQDGHNPATWMLDISSPAFESQLGVDFAELYAKSELYQKNQELIEELSTPAPGTKDLYFPSMYSQSFFEQCKACFWKQYWSYWRNPEYNAVRFFMTIAVGVVFGLIFFNKGDKTNKEQDLLNLLGAMYSAIIFLGVVNTNSVQPVVAIERTVFYRERAAGMYSELPYSLGQVAIELIYVGVQTFVYSLILFSMIGFTWQVDKFLWFYYFIFMSFVYLTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKTSPVQVPGEGFISVKEYLEKHMGYKYDFLGVVAAVHIAFVVLFLFVFAHGIKFLNFQKR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02167 963 MobiDBLite consensus disorder prediction 1 40 - -
Bva03g02167 963 CDD ABC_ATPase 199 233 - -
Bva03g02167 963 Pfam Plant PDR ABC transporter associated 247 304 IPR013581 -
Bva03g02167 963 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 241 963 - -
Bva03g02167 963 PANTHER ATP-BINDING CASSETTE TRANSPORTER 241 963 - -
Bva03g02167 963 Pfam ABC transporter 390 541 IPR003439 GO:0005524
Bva03g02167 963 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 614 IPR003439 GO:0005524
Bva03g02167 963 Pfam ABC-2 type transporter 687 899 IPR013525 GO:0016020|GO:0140359
Bva03g02167 963 Gene3D - 191 286 IPR027417 -
Bva03g02167 963 Pfam ABC-2 type transporter 571 634 IPR043926 GO:0140359
Bva03g02167 963 CDD ABCG_PDR_domain2 359 597 IPR034003 -
Bva03g02167 963 MobiDBLite consensus disorder prediction 11 40 - -
Bva03g02167 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 598 IPR027417 -
Bva03g02167 963 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 31 240 - -
Bva03g02167 963 PANTHER ATP-BINDING CASSETTE TRANSPORTER 31 240 - -
Bva03g02167 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 307 IPR027417 -
Bva03g02167 963 Gene3D - 378 608 IPR027417 -
Bva03g02167 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 238 IPR027417 -
Bva03g02167 963 Pfam ABC-transporter N-terminal 110 175 IPR029481 -
Bva03g02167 963 SMART AAA_5 210 374 IPR003593 -
Bva03g02167 963 SMART AAA_5 399 591 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02167 Bva-Chr3 19074592 19082188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02167 387 574 Calmodulin-binding Proteins AT2G36910 27.228 4.84e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02167 K08711 - vvi:100264279 1140.56