Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02152 atggaagagaagaatGAGATGGATAAGATTGATGATGTGATTTTACCCGGTTTTCGGTTCCACCCCACAGATGAGGAGCTTGTTGATTTTtacctcaaaagaaaaattcaacagCAACCTCTTTCCATTGAGCTGATTAGGCAAGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGCTGGCGAGTACAGGAGAGAAAGAATGGTACTTCTACTGCCCTAGGGATCGAAAGTACAGAAACAGCACGCGGCCGAATCGCGTAACAAGAGCTGGGTTTTGGAAAGCAACTGGAACTGATCGCCCTATATACTCCTCAGATGGGAAATGCATTGGTTTGAAGAAGTCTCTTGTGTTTTACAGAGGTAGAGCTGCCAAAGGGATCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCTTCTCTATCAGATTCTTCAGCTTCCCCCAAAAAGCTCTTAGACAAATCCCTCCCTCCAAGGGATTCATGGGCAATTTGTAAGATATTCAAGAAAACCAACTCGATGTCCATGGCGCAAAAGGCTTTATCTCATTCATGGATGAATCATTTACCAGAAAGTATGGTCTCTGATATACTCAATCAAGGTACAACGAACAGCAACCAGTTCATCAATTCAGAGAACATTTCTTGCACTACAGAAATAGgatcagcagcagcagcagccatTCAATTTTGTGGCAGCAAGGAATTGCACCAGCAAGTGTCAAGTGCTAATCTCACAGCTACTTGTTCAGAGAATATTCACAGCAAGTGTTCCCAATTTCCCGCGTTGAATGGAGACTTTGGTGACAACGGCAGCTTCATCTTCTCAACGCTCGATGGGTCAACTGTAGAGCCTGCCAAGTGCGCAGCTGGTTCCATGATTTTGAACCCAGACTATTTAAGCTTTGAAGGGCCAAATCAGCAGTTTAGTGGCTGCTCAATCAGTGTTGTTGCAGATGAGCAAGAGTGCAGCAGGAAGAGTAGTGTGAACCCAGCTCCAGTACCACAGTGGGAAATTACAGGAAGACCCATCAATGGATTTCCCTTCAGTTTGCCTCCAAATGATAGTGCTACTAATTGGAAGCCTATTAATACTCTAGCATGGGACTCACCTTCACCCCCTTGTCCTAGTGATATGTCCACCAGCTATTCCACTAATAAATGCTACACTTA 1178 0.4194 MEEKNEMDKIDDVILPGFRFHPTDEELVDFYLKRKIQQQPLSIELIRQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLSDSSASPKKLLDKSLPPRDSWAICKIFKKTNSMSMAQKALSHSWMNHLPESMVSDILNQGTTNSNQFINSENISCTTEIGSAAAAAIQFCGSKELHQQVSSANLTATCSENIHSKCSQFPALNGDFGDNGSFIFSTLDGSTVEPAKCAAGSMILNPDYLSFEGPNQQFSGCSISVVADEQECSRKSSVNPAPVPQWEITGRPINGFPFSLPPNDSATNWKPINTLAWDSPSPPCPSDMSTSYSTNKCYT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02152 392 MobiDBLite consensus disorder prediction 373 392 - -
Bva03g02152 392 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 390 - -
Bva03g02152 392 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Bva03g02152 392 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 390 - -
Bva03g02152 392 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Bva03g02152 392 Pfam No apical meristem (NAM) protein 16 140 IPR003441 GO:0003677|GO:0006355
Bva03g02152 392 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02152 Bva-Chr3 18914396 18915823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02152 9 210 NAC Transcription Factor Family AT1G26870 73.039 1.92e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g02152 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02152 - - qsu:112040201 452.21