Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02149 ATGGGAAGACCCCCTTGTTGTGATAAAGAAGGGGTCAAGAAAGGACCATGGACTCCTGAAGAAGATATCATTTTGGTGTCTTACATACAAGAACATGGCCCTGGAAATTGGAGGGCTGTTCCCACACATACAGGTTTGTTAAGATGCAGTAAGAGTTGCAGACTTAGATGGACTAATTACCTCAGGCCAGGAATCAAACGTGGGAATTTCACAGACCAAGAGGAGAAGATGATCATCCACCTTCAAGCCCTTTTGGGAAATagATGGGCTGCCATAGCATCTTACCTTCCACAGAGAACAGATAATGACATTAAGAACTATTGGAATACccatttgaagaagaaactgAAGAAGATGCAAACAGGTTCAGAAGCAAGTTTTGGAAATGGGTTTTCAGATTCCCAAACAATGCCTAGAGGGCAGTGGGAAAGAAGACTCCAAACTGATATTCACATGGCGAAGAGAGCTCTAAGTGAGGCTCTGTCACCAGATAAGGAGATGGAAGAGAAGCCATTTTCTTGCTCATCTGAATCAAAACCAGCTTTAGATggttcctcttcttcttcaaaatcTACCCAATCCTTAGGCTATGCTTCAAGCACAGAGAACATAGCTCGTTTGTTGAAAGGGTGGATAAAGAATCCACCAAAGGCAGCTAGAAGTAACTCAGCAATTACCCAGAATTCCTTCAACAACACAAAGCCATTTTCAGATTCTGCTTCTAGTGAAGGAACTGCAAAGGGAAACAGCATGGAGCTGTCTGACACTTTTGAATCCTTGTTTGGTTTAGAATCTTTAGATTCTTCAAATTCTGAATTTTCCCAATGTCTCTCTCCTGAGGCTACTCTTTTCCAAGATGAGAGTAAGCCAGATACTGGTTCTGAAATGCCCTTCTATTTGCTTGAGGAGTGGCTTCTAGATGAATG 926 0.4039 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTHTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQTGSEASFGNGFSDSQTMPRGQWERRLQTDIHMAKRALSEALSPDKEMEEKPFSCSSESKPALDGSSSSSKSTQSLGYASSTENIARLLKGWIKNPPKAARSNSAITQNSFNNTKPFSDSASSEGTAKGNSMELSDTFESLFGLESLDSSNSEFSQCLSPEATLFQDESKPDTGSEMPFYLLEEWLLDE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02149 308 SMART sant 13 63 IPR001005 -
Bva03g02149 308 SMART sant 66 114 IPR001005 -
Bva03g02149 308 MobiDBLite consensus disorder prediction 219 251 - -
Bva03g02149 308 CDD SANT 69 112 IPR001005 -
Bva03g02149 308 CDD SANT 16 61 IPR001005 -
Bva03g02149 308 MobiDBLite consensus disorder prediction 158 173 - -
Bva03g02149 308 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva03g02149 308 MobiDBLite consensus disorder prediction 178 196 - -
Bva03g02149 308 MobiDBLite consensus disorder prediction 218 251 - -
Bva03g02149 308 Gene3D - 68 129 - -
Bva03g02149 308 MobiDBLite consensus disorder prediction 158 196 - -
Bva03g02149 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bva03g02149 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 307 - -
Bva03g02149 308 Gene3D - 13 66 - -
Bva03g02149 308 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva03g02149 308 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 307 - -
Bva03g02149 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bva03g02149 308 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva03g02149 308 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva03g02149 308 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02149 Bva-Chr3 18895267 18896761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02149 1 308 MYB Transcription Factor Family AT5G62470 53.779 2.90e-107 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g02149 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02149 K09422 - qsu:112022179 451.055