Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02148 ATGAGGAAGCGCCAAGTAGTTGTGAGAAGAGAGCAACCTCAAAGGAGCCAAGACAGTTCATCTTTCACAGTTAGGAGTGTTAGATATGGAGAGTGCCAAAAGAACCATGCTGCAAATGTTGGAGGATACGCCGTAGATGGCTGCCGGGAGTTCATGGCAAGTGGGGAAGAAGGCACAAGTGCTGCTCTGACTTGCGCTGCCTGTGGCTGCCACAGAAACTTTCACAAAAGAGAAGTGAATACTGAGGGTAGCTTGAATGCAAGTGGGTG 269 0.4944 MRKRQVVVRREQPQRSQDSSSFTVRSVRYGECQKNHAANVGGYAVDGCREFMASGEEGTSAALTCAACGCHRNFHKREVNTEGSLNASG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02148 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 78 IPR006456 -
Bva03g02148 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 83 - -
Bva03g02148 89 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 28 79 IPR006456 -
Bva03g02148 89 Pfam ZF-HD protein dimerisation region 27 79 IPR006456 -
Bva03g02148 89 PANTHER BNAA09G44460D PROTEIN 1 83 - -
Bva03g02148 89 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02148 Bva-Chr3 18883274 18884096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02148 1 82 Zinc finger-homeobox gene family AT3G28917 75.862 1.02e-37 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva03g02148 ZF-HD_dimer 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02148 - - tcc:18601512 147.902