Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02136 ATGTCTTCCGAAGAAGCAAATTCGTCTGAACCAGCTCATTCACCTTCTGTGGAagaattgaatgaaaatttgggTCAAAGACTGTCTCAACTTGTGTCCAGGATTCTCCGAATTTCATCTCGGCAAGAAAACCCACGATCGGATTCGGATGGTCGTGGCCGGATCCGGATTATCATGTTCAACGCTTCTTCTGGAAACATGATCGTGTTTGAGGGCCCGGACGATGTTGAATCCATATTCCAAGAGCTGGCAGGGAAGTCTGGGGTGTCTCCGGCCACTCAGGATTCCATTGACGCTTTGCCGAAAGCTGTGGTGACCGAAGAAGGTACAGATTGTCCTATTTGCCTAGAGGACAACGAAATCGGCAGTGAAGTTAAGGAAATGCCTTGTAAACACAGGTTTCACTCCGGGTGTATTGAGAAATGGCTGGGAATTCATGGGTCATGCCCGATTTGCCGGTTCTTGATGCCGGTGGCTGAAAACAAAAGCAGCAGCGACGCAGAAGATGGTGGTGAGAGGCTAGAGATTGGTGAGATTGGGGAAGGAATTTTATCTGTCAGCGTTTGGGCTCGGAGGGGTGATCCAAGAGGTGACCCGATGGATTTGGATTCGGAGTTGAATCAAGACGAGAATTCTGCCTCCGGAGATGATGATTCCTCGGTGATAGAAGACATGGAATTagctta 686 0.4738 MSSEEANSSEPAHSPSVEELNENLGQRLSQLVSRILRISSRQENPRSDSDGRGRIRIIMFNASSGNMIVFEGPDDVESIFQELAGKSGVSPATQDSIDALPKAVVTEEGTDCPICLEDNEIGSEVKEMPCKHRFHSGCIEKWLGIHGSCPICRFLMPVAENKSSSDAEDGGERLEIGEIGEGILSVSVWARRGDPRGDPMDLDSELNQDENSASGDDDSSVIEDMELA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02136 228 MobiDBLite consensus disorder prediction 210 228 - -
Bva03g02136 228 SMART ring_2 112 152 IPR001841 -
Bva03g02136 228 ProSiteProfiles Zinc finger RING-type profile. 112 153 IPR001841 -
Bva03g02136 228 PANTHER - 32 166 - -
Bva03g02136 228 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 32 166 - -
Bva03g02136 228 MobiDBLite consensus disorder prediction 1 23 - -
Bva03g02136 228 MobiDBLite consensus disorder prediction 190 228 - -
Bva03g02136 228 CDD RING-H2_PA-TM-RING 111 153 - -
Bva03g02136 228 SUPERFAMILY RING/U-box 104 158 - -
Bva03g02136 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 158 IPR013083 -
Bva03g02136 228 Pfam Ring finger domain 111 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02136 Bva-Chr3 18786632 18787477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02136 24 172 C3H Transcription Factor Family AT1G26800 42.484 2.25e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02136 - K11982 oeu:111375801 150.214