Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02129 ATGGGAAGAAATATCTGCATATTGATTGCACCAAAGCAACTTGTTTCGGCAAAGGACACTGTCAAAAGGACACCAGTCCTCTCACAAAAGTACAGTTTCCCCCTTCATTTCCTCAAACACCTCCTTTCAAGGTTCAGCTTCTTGAAAATGGCTCTTcttagctttcttcttctgagTTTTCTCTCCTTGGCCTCTTATGCAAATGGGTATGGTTATGGTGGATGGATCAATGCTCATGCCACTTTCTATGGGGGCAGTGATGCTTCTGGCACAATGGGTGGTGCTTGTGGTTATGGAAACCTCTACAGCCAAGGTTATGGGACAAACACAGCAGCACTTAGCACTGCACTGTTCAACAATGGCTTGAGTTGTGGTGCATGTTATGAAATTAGATGTGTGAATGACCCACAATGGTGCCTCCCTGGATCCATTGTAGTCACTGCCACTAATTTCTGCCCACCAGGTGGTTGGTGTGACCCCCCAAACcaccattttgatctttctcaGCCTATTTTCCAGCACATTGCCCAATATAGAGCTGGAATTGTCCCTGTAATTTATagaagGGTGAGGTGCAGGAGAAGTAGTGGCATCAGATTCACCATAAATGGCCATTCTTACTTCAACTTAGTGCTAGTGACTAATGTTGGAGGTGCTGGTGATGTGCATTCTGTGGCCATCAAAGGCTCAAGGACTAGATGGCAAACCATGTCAAGGAATTGGGGCCAAAACTGGCAGAGCAACTCCTACCTCAATGGACAGGCACTTTCCTTTTTGGTGACAGCCAGCGACGGCCGCAGCATTGTTTCATACAATGTTGCCCCAGCAAGCTGGTCTTTTGGCCAGACTTACACTGGAAGACAGTTTcgttacta 875 0.44 MGRNICILIAPKQLVSAKDTVKRTPVLSQKYSFPLHFLKHLLSRFSFLKMALLSFLLLSFLSLASYANGYGYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCVNDPQWCLPGSIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVIYRRVRCRRSSGIRFTINGHSYFNLVLVTNVGGAGDVHSVAIKGSRTRWQTMSRNWGQNWQSNSYLNGQALSFLVTASDGRSIVSYNVAPASWSFGQTYTGRQFRY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02129 291 PANTHER EXPANSIN 48 290 - -
Bva03g02129 291 PRINTS Expansin signature 196 208 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 144 154 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 243 264 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 172 185 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 132 143 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 155 172 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 272 288 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Bva03g02129 291 PRINTS Expansin signature 105 119 IPR002963 GO:0009664
Bva03g02129 291 Gene3D - 195 289 IPR036749 -
Bva03g02129 291 SUPERFAMILY Barwin-like endoglucanases 74 215 IPR036908 -
Bva03g02129 291 PANTHER EXPANSIN-A15 48 290 IPR002963 GO:0009664
Bva03g02129 291 Pfam Lytic transglycolase 110 187 IPR009009 -
Bva03g02129 291 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 207 286 IPR007117 -
Bva03g02129 291 Gene3D - 62 193 IPR036908 -
Bva03g02129 291 SMART dpbb_1 110 187 IPR007112 -
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 180 196 IPR007118 GO:0005576
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 74 89 IPR007118 GO:0005576
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 92 110 IPR007118 GO:0005576
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 272 286 IPR007118 GO:0005576
Bva03g02129 291 PRINTS Expansin/Lol pI family signature 114 132 IPR007118 GO:0005576
Bva03g02129 291 Pfam Expansin C-terminal domain 198 275 IPR007117 -
Bva03g02129 291 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 93 197 IPR007112 -
Bva03g02129 291 SUPERFAMILY PHL pollen allergen 196 286 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02129 Bva-Chr3 18757072 18760547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02129 49 290 Expansin Gene Family AT2G03090 78.000 4.96e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02129 K20628 - gmx:100790170 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02129 03 18757072 18760547 Bva06g01209 06 9410780 9411787 ECH
Bva03g02129 03 18757072 18760547 Bva05g00492 05 2409645 2411261 ECH
Bva03g02129 03 18757072 18760547 Bva03g02129 03 18757072 18760547 ECH
Bva08g01512 08 7960662 7962763 Bva03g02129 03 18757072 18760547 ECH
Bva11g00971 11 11601324 11603190 Bva03g02129 03 18757072 18760547 ECH