Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02123 ATGGGTCGATCACCATGCTGCGACAAGGTCGGCTTAAAGAAAGGGCCATGGACGCCTGAGGAAGATCAGAAACTCTTGGCTTATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCATCGAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGGCTAAGATGGACTAATTATCTTAGGCCTGATATTAAGAGGGGAAAGTTTAGTTTGCAAGAAGAGCAAACCATCATTCAACTGCATGCCCTCTTGGGAAACAGGTGGTCGGCTATAGCCACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACGCATCTTAAGAAAAGGTTAGCCAAAATGGGAATTGACCCAGTAACCCACAAGCCCAAGAATGATGCTCTTCTCTCTAGCGACGGTCAATCCAAGAGTGCAGCCAACCTTAGCCACATGGCTCAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGATTGGTTAGGGAATCCAAGCTACGTTCACATTCACTGCAGCATCAGCTTGGCAATTCTGGGTTTgcatcttcatcttctgcaTCTTCACCGCCTGTTCTGAATAAACCAGAGGCACCCCCTTTGCCTTCACGGTCTCTAGATGTACTTAAGGCTTTGAATGTTGGGTGGCTAAGATCTAATGAAGGCAACGGCGGTATTGTCACAGACCTTGAATCCCCCACATCTACCCTAACTTTCTCCGAGAATGCGCCCCCATTATTGACTGGTGGACTTGGAGAAAACACAATGCCAATGATTGAGTTTGTGGGGACTTCAGGTTCTTCAGAAAGGGTTGTGAAAGAAGAAGGTGAGCAAGAGTATCTGCCAGAATACAAAGATGGTACGGAGAATTCCTTGTCGTTTACATCTAGCCTGCATGACATGACAATTTCCATGGAAGGTACATGGACCTCTGAATCTCTCAGGACTAGTGGTGCACATGTCCCTGTTGGAGATGTTATTGCTGAGGAGGGCTTCACAAATCTTTTGCTTAATGCTAATTCCGATGACCGGAGTTTGTCCGAGGGTGGGGGAGAGTCTAATAATGGTGAAGCTAGTGGCAATGGCAGTGACTTCTACGAAGATAACAAGAACTACTGGAACAGTATTCTTAATTTAGTGAATTCTTCCCCCTCAGATTCCCCCATATTCTA 1178 0.4567 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSSDGQSKSAANLSHMAQWESARLEAEARLVRESKLRSHSLQHQLGNSGFASSSSASSPPVLNKPEAPPLPSRSLDVLKALNVGWLRSNEGNGGIVTDLESPTSTLTFSENAPPLLTGGLGENTMPMIEFVGTSGSSERVVKEEGEQEYLPEYKDGTENSLSFTSSLHDMTISMEGTWTSESLRTSGAHVPVGDVIAEEGFTNLLLNANSDDRSLSEGGGESNNGEASGNGSDFYEDNKNYWNSILNLVNSSPSDSPIF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02123 392 Gene3D - 13 66 - -
Bva03g02123 392 CDD SANT 69 112 IPR001005 -
Bva03g02123 392 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva03g02123 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva03g02123 392 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva03g02123 392 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva03g02123 392 MobiDBLite consensus disorder prediction 345 366 - -
Bva03g02123 392 CDD SANT 16 61 IPR001005 -
Bva03g02123 392 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 388 - -
Bva03g02123 392 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva03g02123 392 MobiDBLite consensus disorder prediction 177 194 - -
Bva03g02123 392 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva03g02123 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva03g02123 392 SMART sant 13 63 IPR001005 -
Bva03g02123 392 SMART sant 66 114 IPR001005 -
Bva03g02123 392 Gene3D - 69 116 - -
Bva03g02123 392 MobiDBLite consensus disorder prediction 132 147 - -
Bva03g02123 392 MobiDBLite consensus disorder prediction 123 147 - -
Bva03g02123 392 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 388 - -
Bva03g02123 392 MobiDBLite consensus disorder prediction 177 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02123 Bva-Chr3 18710133 18712701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02123 1 389 MYB Transcription Factor Family AT3G01140 55.721 7.73e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g02123 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02123 K09422 - jre:108985936 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02123 03 18710133 18712701 Bva03g02123 03 18710133 18712701 ECH