Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02114 ATGGCAGCTTGTATAATCACGGTATCACAGGACGGAAATGGAGACTACCAAACGGTGCAGGAAGCAATCGATGCTGTTCCACTCGGCAACACTCGTCGAACGGTGATTCGAGTGGCTCCGGGCATCTACAAGCATCCAGTCTATGTGCCCAAGACCAAAAATTTCATCACTCTCGCGGGTCTGCGTCCAGAAGATACTGTGCTTACTTGGAAAAACACTGCTGCCAGAATCGAGCACCACCAGGCTGCTAGGTTGATCGGGACTGGGACCTTTGGTTGTGGGAGCACCATTGTGGAAGGAGAGGAATTTATTGCTGAGAATATTACTTTTGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGTAGGTTCCTTGGATGGCAGGACACTCTGTACTTGCATTATGGCAAACAGTATCTAAAAGATTGCTATATTGAAGGAAGTGTGGACTTCATTTTCGGCAACAGCACTGCTCTTTTGGAGCATTGTCATATCCACTGCAAATCTCAAGGCTTTATAACTGCACAGAGCAGAAAATCTTCACAAGAAACAACCGGTTATGTATTCTTGAGATGCGTTATCACAGGCAATGGAGGCTCTTCATACATGTATCTTGGTCGACCCTGGGGACCTTATGGAAGAGTGATCTTTGCTTACTGTTACATGGATCAATGTATAAAGCATGAGGGCTGGCACAACTGGGAAAAAGTTGAGAACGAGAGAAGTGCTTGTTTTTACGAATACAGGTGTTTTGGACCGGGTTGTTGCCCGCCGAAACGAGTAGGATGGTCTAGAGAATTGGTGGAGGAAGAAGGAGAGCAGTTCCTCAAGCACCAGTTCATCGACCCAGAACCCAGTAGACCTTGGCTTGCCCAAAGAATGGCCTTGAGGATACCATTTTCtgctta 950 0.4674 MAACIITVSQDGNGDYQTVQEAIDAVPLGNTRRTVIRVAPGIYKHPVYVPKTKNFITLAGLRPEDTVLTWKNTAARIEHHQAARLIGTGTFGCGSTIVEGEEFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGSSYMYLGRPWGPYGRVIFAYCYMDQCIKHEGWHNWEKVENERSACFYEYRCFGPGCCPPKRVGWSRELVEEEGEQFLKHQFIDPEPSRPWLAQRMALRIPFSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02114 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Bva03g02114 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Bva03g02114 316 SUPERFAMILY Pectin lyase-like 2 300 IPR011050 -
Bva03g02114 316 Gene3D - 3 309 IPR012334 -
Bva03g02114 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Bva03g02114 316 PANTHER PECTINESTERASE 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02114 Bva-Chr3 18599787 18602546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02114 5 309 Carbohydrate Esterase AT5G47500 37.421 2.60e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02114 K01051 - gmx:100786786 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02114 03 18599787 18602546 Bva03g02114 03 18599787 18602546 ECH