Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02104 ATGGGTTGCATTAACTCCAAGAAAGCCAAAGCTTCACCTGCGTGTGTGCATTCGGCGAGGGTCACCGATCATGGGTCTGTGGTTGCGGAGCCTGCGTCCAGAACCCAATCTGGGATTTCGAATTATGACAACAAAGGGGAAGTGAAATCGGAGGACCGGAGCCGGGATAGGAAGAGGTCCAAGTCTAAAAAGGAAAGCTCCAAAAATAGTGGGTCTTCGAGTTTCAGGCTCGGCTTCTCGTATAGGTCTGTGGAAGCTGAGCAGAATGCAGCTGGATGGCCCCCTTGGCTCACCGCTTCTGCTGGGGAAGCTATTCATGGATGGCTACCCCTCAAAGCAGAGTGTTTTGAGAAATTAGACAAGATTGGACAAGGTACATATAGCAGTGTGTTCCGAGCACGAAAAGTTGAAACTGGAAGGATCTTTGCCCTGAAGAAAGTGCGCTTTGATAATTTTCAGCCTGAGAGCATTAGGTTCATGGCTAGAGAAATAGCAATTCTCCGCAGGCTAGACCACCCAAACATCATGAAACTTGAGGGTCTaatcacttcaaaaatatcaaacagCATATACCTTGTATTTGAATACATGGAGCATGATCTTGCAGGCCTAGTATCTTCTCCTGACGTCAAGTTCACTGAGGCACAGGTTAAATGTTACCTGAGGCAGCTATTAAGTGGAATTGAGCATTGTCATGTTCGTGGTGTTATGCATCGAGACATTAaagcatcaaatatattagtGAATAATGAAGGTATCCTCAAGATAGGAGATTTTGGATTAGCAAATATCCTTAGCCCACATCACAAGCAACCATTAACCAGTCGTGTAGTAACTCTATGGTATCGTCCTCCTGAACTCTTGATGGGATCAACAAGTTATGGAGTATCAGTGGATCTGTGGAGTGTGGGCTGTGTATTTGCAGAATTCTTTCTTGGGAAGCCTATCCTTAAGGGGAGAACCGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGCGGTTCTCCACCTGATGAGTTCTGGAAAAAGTCTAAGCTTCCTCATGTGACAATGTTTAAACCTCAAACTAATTATGAAAACAGTCTTCGGGAGAGGTGTAAAGAAATTCCAGAAACTGCAGTAAACCTAATAGAGACTCTGCTGTCCATTGACCCTGATAAACGTGGGACTGCTTCCTCTGCCATAATGTCAGAGTATTTCAGCACCAAACCATATGCATGTGATCCACCAAGCCTGCCGAAGTATCCACCTAACAAAGAAATGGATGCTAAAAATCGGGAAGAAGCACGCAGGAGAAAGACTGGAACTAAATTACATGACGCTACAACGTCAAGAAGGCTTAGAAGAGCCCGTAAAATTGTGCAAGAACCAAACCTTGGGACTAAACCAATTAGGGAAGAGGAAGGACATtataatgatgatgataaagCAAATATTGGCAAGGGCAAAGGAGGATCTATGAACAGAGAGCATATGAAGCCAATATCAGAAGTAACGTGGGAGGATACTCGTTCAGTAAATATGTCTAATGAGTATGGTTTATTGGCAGGAGGGCCAGTAGCAGTATCAGGATCTAGTGGGTTTTCATGggcaaaacgaagaaaaccagATAATTCATCCACGTTATCAGATGGCTCACGAAGCAAAATTAGTGCACTGGATCCATCTTTTGCAAAAGGCACGTACGATTTAACAAGACGAGGAATAAATGTTTCAGGAAGAAAATATAACGATAATGCCCTTTCTGAATATACATCCTTGGCTTATGATCCCACAGAACAAAATACTCAGGGCCTGAAGAACCAAGCTGAGCATATGGAATTATCCAGACGACTGCTTTCCCGACCAAATAATAAAGTAGACGAGTTTTTGCTCAAGAATGAAAATAGTATTCGTCGAGCAGCACGCAAATCAAGGCTTGGAAGAGACTA 1931 0.4205 MGCINSKKAKASPACVHSARVTDHGSVVAEPASRTQSGISNYDNKGEVKSEDRSRDRKRSKSKKESSKNSGSSSFRLGFSYRSVEAEQNAAGWPPWLTASAGEAIHGWLPLKAECFEKLDKIGQGTYSSVFRARKVETGRIFALKKVRFDNFQPESIRFMAREIAILRRLDHPNIMKLEGLITSKISNSIYLVFEYMEHDLAGLVSSPDVKFTEAQVKCYLRQLLSGIEHCHVRGVMHRDIKASNILVNNEGILKIGDFGLANILSPHHKQPLTSRVVTLWYRPPELLMGSTSYGVSVDLWSVGCVFAEFFLGKPILKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPHVTMFKPQTNYENSLRERCKEIPETAVNLIETLLSIDPDKRGTASSAIMSEYFSTKPYACDPPSLPKYPPNKEMDAKNREEARRRKTGTKLHDATTSRRLRRARKIVQEPNLGTKPIREEEGHYNDDDKANIGKGKGGSMNREHMKPISEVTWEDTRSVNMSNEYGLLAGGPVAVSGSSGFSWAKRRKPDNSSTLSDGSRSKISALDPSFAKGTYDLTRRGINVSGRKYNDNALSEYTSLAYDPTEQNTQGLKNQAEHMELSRRLLSRPNNKVDEFLLKNENSIRRAARKSRLGRD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02104 643 Gene3D Transferase(Phosphotransferase) domain 1 199 440 - -
Bva03g02104 643 MobiDBLite consensus disorder prediction 525 549 - -
Bva03g02104 643 PANTHER CYCLIN-DEPENDENT KINASE 48 569 - -
Bva03g02104 643 MobiDBLite consensus disorder prediction 532 549 - -
Bva03g02104 643 SUPERFAMILY Protein kinase-like (PK-like) 111 408 IPR011009 -
Bva03g02104 643 MobiDBLite consensus disorder prediction 407 444 - -
Bva03g02104 643 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02104 643 MobiDBLite consensus disorder prediction 419 444 - -
Bva03g02104 643 Gene3D Phosphorylase Kinase; domain 1 104 198 - -
Bva03g02104 643 MobiDBLite consensus disorder prediction 29 44 - -
Bva03g02104 643 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Bva03g02104 643 PANTHER CELL DIVISION PROTEIN KINASE 48 569 - -
Bva03g02104 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bva03g02104 643 MobiDBLite consensus disorder prediction 463 489 - -
Bva03g02104 643 CDD STKc_CDK9_like 116 400 - -
Bva03g02104 643 MobiDBLite consensus disorder prediction 1 74 - -
Bva03g02104 643 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02104 643 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02104 643 MobiDBLite consensus disorder prediction 45 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02104 Bva-Chr3 18544608 18550252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02104 108 432 Core Cell Cycle Gene Families AT5G10270 46.765 2.75e-108 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva03g02104 Pkinase 3.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02104 - - gmx:100781059 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02104 03 18544608 18550252 Bva03g02104 03 18544608 18550252 ECH
Bva03g02104 03 18544608 18550252 Bva04g00308 04 1872104 1877422 ECH