Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02103 ATGACGACGAAGAACGGAGAATCCGTCACGGCGGCGCCGCCCCCGCGTCCCACTATAACTCTTCCACCGCGGCCTTCCATCGAGGCCTTCTTCACCGTTGGAGCCGGGGCCAGTCCTGGTCCGATGACTCTCGTATCTAGCTTCTTCTCCGACAACTACCCTGATTCTGATTGTCGGTCTTTCTCGCAGTTGCTAGCCGGAGCTATGGCTTCTCCGCTCGCGCTAGGCGTGAGGCCGAGCTTCTATACGGACAATTCCACCGACAATTCTTCCAAAGAGGTGGGTTCTGAGCAAGCGGCGGAGAAGAATTTGGGGTTTAAGCAGAGTAGGCCCATGAATTTAGTGGTTGCTCGTTCGCCATTGTTTACAATTCCACCTGGGTTAAGCCCTTCTGGGTTGCTTAACTCTCCGGGGTTCTTTTCTCCGCAGaGTCCCTTTGGGATGTCCCACCAACAGGCTTTAGCACAAGTTACAGCTCAAGCTGTCCTAGCACAATCTCATTTGCATATGCAAACAGATTATCAGCCTTCTTCAATGGCAGCTCCTGCTGAACAGCAGCAATCCTTTTCCCAAAATGAAACTCCAGAGCAGCAAGTGGCACCATCTATATCAGATCCTAAAAATGGCCAACTGGAAACATCAGAGATTTCTAATGCCGATAAGAAATATCAAACCCCTTCTTTGGCCATTGATAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGGCAGAAACAGGTTAAGGGGAGTGAGTTTCCACGGAGCTACTACAAGTGTACGCATCTGAATTGCCCTGTCAAGAAAAAGATTGAACGTGCCCTGGATGGCCACATAACTGAAATAATCTATAAGGGCCAGCATAACCATGAATTGCCTCAGTCAAATAAGAGAGCTAAAGATAATTGTGATTCAAATGGAAATGCAAGCATTCAAGTTAAGTCTGATTCAAACTCGCAAGGCAGGGGTGGAAGTTCAAACAAGTTCAGTGAAACTATGCCTGATCAGTCAGTGCCTGAGAGTGATCAGACCTCCAATCTGGGGGTTTCCAGGCTTCCTGGATCGAGTGGGAGTGAGGAAACAGGTGATGTAGATATTagagaagaagatggagaagaTGGTGAACCAAATCCAAAGAGAAGGAACACGGATCCTGGAACTTCTGAAGTATCTTTATCTCACAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTTGACCTTTTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTAGTCAAGGGAAATCCTCATCCAAGGAGCTATTACAAGTGCACTAGTGCAGGATGCAATGTCCGTAAGCATGTTGAGAGAGCTTCAACAGACCCCAAAGCTGTCATAACCACCTATGAGGGGAAGCATAATCACGATGTACCTTCTGCTAGAAACAGTAGCCACAACACAGCTAATAGCAGTTCAATGCCACAAAAGCCACATAAAGTGGTGCCTGAGAAGCATCCTTTGCTTAATGACATGGATTTCGGAAATAATGACCAAAGACCAGTTGTTTTACGCTTAAAAGAGGAGCAAATCATAGTGTA 1583 0.4637 MTTKNGESVTAAPPPRPTITLPPRPSIEAFFTVGAGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLALGVRPSFYTDNSTDNSSKEVGSEQAAEKNLGFKQSRPMNLVVARSPLFTIPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHLHMQTDYQPSSMAAPAEQQQSFSQNETPEQQVAPSISDPKNGQLETSEISNADKKYQTPSLAIDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKIERALDGHITEIIYKGQHNHELPQSNKRAKDNCDSNGNASIQVKSDSNSQGRGGSSNKFSETMPDQSVPESDQTSNLGVSRLPGSSGSEETGDVDIREEDGEDGEPNPKRRNTDPGTSEVSLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPSARNSSHNTANSSSMPQKPHKVVPEKHPLLNDMDFGNNDQRPVVLRLKEEQIIV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02103 527 MobiDBLite consensus disorder prediction 84 105 - -
Bva03g02103 527 ProSiteProfiles WRKY domain profile. 408 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 Gene3D WRKY domain 398 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 Gene3D WRKY domain 220 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 PANTHER WRKY TRANSCRIPTION FACTOR 73 10 525 - -
Bva03g02103 527 MobiDBLite consensus disorder prediction 465 508 - -
Bva03g02103 527 Pfam WRKY DNA -binding domain 235 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 Pfam WRKY DNA -binding domain 414 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 MobiDBLite consensus disorder prediction 174 224 - -
Bva03g02103 527 MobiDBLite consensus disorder prediction 1 24 - -
Bva03g02103 527 MobiDBLite consensus disorder prediction 174 239 - -
Bva03g02103 527 MobiDBLite consensus disorder prediction 299 357 - -
Bva03g02103 527 ProSiteProfiles WRKY domain profile. 229 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 SUPERFAMILY WRKY DNA-binding domain 233 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 SUPERFAMILY WRKY DNA-binding domain 405 473 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 525 IPR044810 GO:0003700
Bva03g02103 527 SMART WRKY_cls 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 SMART WRKY_cls 413 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g02103 527 MobiDBLite consensus disorder prediction 287 396 - -
Bva03g02103 527 MobiDBLite consensus disorder prediction 475 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02103 Bva-Chr3 18539418 18543192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02103 16 525 WRKY Transcription Factor Family AT2G03340 54.253 8.94e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva03g02103 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02103 - - aip:107635357 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02103 03 18539418 18543192 Bva03g02103 03 18539418 18543192 ECH